Spatial distribution of zooplankton size spectra on the French continental shelf of the Bay of Biscay during spring 2000 and 2001
During two cruises in springtime (18 March to 13 April 2000 and 27 March to 4 June 2001), the whole French continental shelf of the Bay of Biscay was sampled to obtain an overview on the zooplankton community size structure. A laboratory optical plankton counter (OPC-1L) was used to process plankton net tow samples and estimate abundance, biovolume, and general characteristics of size spectra. In a second step, biomass estimates were extrapolated from size by using a conversion factor. Both biomass and abundance estimates show spatial patterns with a clear coastal-open sea gradient for both years. The coastal area was characterized by the highest biomasses and abundances per volume. A first analysis of the zooplankton community size spectra was made by using the slope of the normalized biomass size spectrum. Different spatial patterns of zooplankton size spectra were highlighted for spring 2000 and 2001. The highest slopes were found for the coastal zone, showing a large ratio of small organisms, although this was less marked in the springtime 2000. Stations characterized by high proportions of large organisms were located in majority in the north of the bay and at the shelf break. A second analysis using the size probability distributions of organisms revealed a nearly permanent nonlinearity of probability distributions. This implied the community structure was not in an equilibrium state during spring and this nonlinearity could be locally related to dominant species dynamics.
(Journal of Geophysical Research. Oceans. vol. 111, n° 2169-9275, 26/08/2026)
EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, LOPB, INSU - CNRS, CNRS
Monitoring the maximum turbidity zone and detecting fine-scale turbidity features in the Gironde estuary using high spatial resolution satellite sensor (SPOT HRV, Landsat ETM+) data
This study concerns the quantification of suspended particulate matter in the highly turbid estuarine waters of the Gironde, France, from high spatial resolution remotely sensed data, SPOT (Satellite Pour l'Observation de la Terre) High Resolution Visible (HRV), Landsat Enhanced Thematic Mapper Plus (ETM+). The methodology is based on calibration relationships established between the remote sensing reflectance (R-rs) signal and suspended particulate matter concentration (SPM), from in situ optical measurements. These relationships are valid in the long term as R-rs ratios between near-infrared (NIR) and visible wavebands are relatively independent of the particle grain-size and mineralogy. Consequently, they can be applied to satellite images, even if no simultaneous in situ measurements are carried out concurrently with the satellite overpass. Selected satellite sensor data are corrected for atmospheric effects using radiative transfer code, then converted into surface water SPM concentrations according to the established calibration relationships. Resulting SPM maps are presented for different river flow and tidal conditions. These maps are used to locate the maximum turbidity zone and observe its tidal and seasonal movements. The high spatial resolution of SPOT HRV and Landsat ETM+ satellite sensor data also shows detailed turbidity features in the estuary, resulting from re-suspension phenomena over banks and turbulent currents.
(INTERNATIONAL JOURNAL OF REMOTE SENSING. vol. 27, pp. 2303-2321, 26/08/2026)
LOV, OOVM, UPMC, INSU - CNRS, CNRS, UPMC, INSU - CNRS, CNRS, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS
Metallothionein gene expression and protein levels in triploid and diploid oysters Crassostrea gigas after exposure to cadmium and zinc.
Quantitative real-time polymerase chain reaction (PCR) was used to compare for the first time the differential expression of metallothionein (MT) isoform genes, together with biosynthesis of the total MT proteins, in the gills of triploid and diploid juvenile Pacific oyster Crassostrea gigas in response to cadmium (Cd) and zinc (Zn) exposure. Oysters were exposed to Cd (0.133 mM), Zn (15.3 mM), and Cd1Zn for 14 d. Results showed similar response capacities to metal exposures in the two populations. No significant difference was revealed in terms of MT gene expression, MT protein synthesis, and Cd accumulation. However, triploid oysters bioaccumulated Zn 30% less efficiently than diploid oysters. Among the three MT isoform genes, CgMT2 appeared to be more expressed than CgMT1, whereas CgMT3 appeared to be anecdotal (106 times lower than CgMT2). CgMT2 and CgMT1 gene expression levels were increased sevenfold in the presence of Cd, whereas Zn appeared to have no effect. A twofold increase in MT protein levels occurred in response to Cd exposure. Discrepancies between mRNA and protein levels suggest that in C. gigas MT are regulated at the transcriptional level, as well as at the translational level.
(Environmental Toxicology and Chemistry. vol. 25, n° 0730-7268, pp. 412-418, 26/08/2026)
LEESA, UB, CNRS, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, LEMAR, IRD, IFREMER, UBO EPE, CNRS
SYNCARID CRUSTACEANS FROM THE MONTCEAU LAGERSTÄTTE (UPPER CARBONIFEROUS; FRANCE)
Key aspects of the morphology, autecology, systematics and taphonomy of the crustacean syncarids from the Montceau Lagerstätte (Upper Carboniferous, Stephanian B; France) are presented. Palaeocaris secretanae is the most abundant faunal element of the Montceau biota and shows striking morphological similarities with Palaeocaris typus from the Mazon Creek Lagersta¨tte (Westphalian D; Illinois, USA). Palaeocaris secretanae was a shrimp-like animal with a short head (no head shield), large mandibles, 14 trunk segments (the first one being reduced) and a fan-like caudal termination. Both the body and the appendage design indicate abilities for crawling on the substratum (slender endopods) and for escape reaction (uropodal fan, pleonal flexibility), although swimming activities may have been reduced (trunk appendages with small flap-like exopods). Details of the appendages involved in feeding, e.g. mandibles and maxillipeds, indicate poor ability for predation but point to an omnivorous detritus feeding mode. Poorly developed respiratory organs (small cylindrical epipods) suggest a relatively low level of locomotory activity. The field of vision may have been large and panoramic (stalked eyes). Rows of pores on 12 trunk segments are interpreted as possible sensory organs used for current detection. Females were brooding eggs (clusters of eggs preserved along anteroventral trunk). Microprobe analysis indicates that siderite is the major component of the nodules. Four events played a key-role in the three-dimensional preservation of syncarids: (1) rapid burial, (2) minimal decomposition, (3) phosphatic mineralization shortly after the animal's death and (4) nodule formation around the carcass. Palaeocaris secretanae is morphologically close to Recent syncarids such Anaspides tasmaniae (freshwater streams, Australia) in its general body plan and detailed anatomy, e.g. mouth parts, indicating morphological stasis in syncarids over more than 200 million years.
(Paleontology. vol. 49, pp. 647-672, 26/08/2026)
PEPS, UCBL, INSU - CNRS, CNRS, LDO, INSU - CNRS, UBO EPE, CNRS
Cytochrome c Oxydase Subunit I Gene is Up-regulated by Cadmium in Freshwater and Marine Bivalves
Inhibition of the mitochondrial electron transfer chain and induction of reactive oxygen species (ROS) production are one of the roots of cadmium (Cd) toxicity. To appreciate the impact of Cd on mitochondria, we focused on the expression of CoxI gene which encodes the subunit I of the Cytochrome c oxidase (complex IV of the respiratory chain). CoxI gene expression was studied by real-time quantitative PCR in three species: two freshwater bivalves (Corbicula fluminea and Dreissena polymorpha) and one marine bivalve (diploid or triploid Crassostrea gigas). Bivalves were exposed for 10 or 14 days to 0.13 μM Cd$^2$$^+$ and 15.3 μM Zn$^2$$^+$ in controlled laboratory conditions. We demonstrate that in the three mollusk species CoxI gene was up-regulated by Cd. Zinc (Zn), which is known to have antioxidant properties, had no effect on CoxI gene expression. In the presence of Cd and Zn, CoxI gene inducibility was lower than after a single Cd exposure, in each species; result that could not be fully explained by a decreased Cd accumulation. CoxI gene induction by Cd was 4.8-fold higher in triploid oysters than in diploid ones, indicating a possible influence of triploidy on animal responses to Cd contamination.
(BioMetals. vol. 19, n° 0966-0844, pp. 237-244, 26/08/2026)
EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS
Temporal variability in phytoplankton pigments, picoplankton and coccolithophores along a transect through the North Atlantic and tropical southwestern Pacific
Biogeochemical processes in the sea are triggered in various ways by chlorophyll-containing phytoplankton groups. While the variability of chlorophyll concentration at sea has been observed from satellites for several years, these groups are known only from cruises which are limited in space and time. The Geochemistry, Phytoplankton and Color of the Ocean programme (GeP&CO) was set up to describe and understand the variability of phytoplankton composition on large spatial scales under a multi-year sampling strategy. It was based on sea-surface sampling along the route of the merchant ship Contship London which travelled four times a year from Le Havre (France) to Noumea (New Caledonia) via New York, Panama and Auckland. Observations included the measurement of photosynthetic pigments, counts of picoplanktonic cells by flow cytometry (Prochlorococcus, Synechococcus, and picoeucaryotes) and counting and identification of coccolithophores. The results confirmed that tropical areas have low seasonal variability and are characterized by relatively high divinyl-chlorophyll a and zeaxanthin concentration and that the variability is strongest at high latitudes-where the phytoplankton biomass and population structure are found to have large seasonal cycles. Thus, the spring bloom in the North Atlantic and an austral winter bloom north of New Zealand are marked by chlorophyll concentrations which are often higher than 0.5 mu g l(-1) and by high concentration of fucoxanthin (a pigment used as an indicator for diatoms), while summer populations are dominated by Prochlorococcus sp. and have low chlorophyll concentrations. Apart from this yearly bloom at temperate latitudes, fucoxanthin is scarce, except in the equatorial upwelling zone in the eastern Pacific Ocean, where it is found in moderate amounts. In this region, relatively high chlorophyll concentrations extend generally as far as 14 degrees S and do not respond to the seasonal strengthening of the equatorial upwelling during the austral winter. Prochlorococcus, which is known to dominate in oligotrophic tropical seas and to disappear in cold conditions, in fact has its minimum during the spring bloom in the North Atlantic, rather than during the winter. Coccolithophores are ubiquitous, showing a succession of species ill response to oceanic conditions and provinces. 19'Hexanoyloxyfucoxanthin, the pigment generally considered as all indicator of coccolithophores, is relatively abundant at all times and in all regions, but its abundance is generally not tightly correlated with that of coccolithophores. The regional differences revealed by these results are in overall agreement with Longhurst's division of the ocean into ecological provinces. (c) 2006 Elsevier Ltd. All rights reserved.
(Deep Sea Research Part I: Oceanographic Research Papers. vol. 53, n° 0967-0637, pp. 689-712, 26/08/2026)
LOCEAN, IPSL, ENS-PSL, PSL, UVSQ, UPMC, CEA, INSU - CNRS, X, IP Paris, CNES, CNRS, MNHN, IRD, UPMC, INSU - CNRS, CNRS, CYROCO, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, LOBB, OOB, UPMC, CNRS, UPMC, INSU - CNRS, CNRS
TRACE FOSSILS FROM NEARSHORE TO OFFSHORE ENVIRONMENTS: LOWER DEVONIAN OF BOLIVIA
Abundant and diverse trace fossils occur in deposits, recording an Early Devonian transgression in Bolivia. The very well-exposed Presto-El Peral section is located in the Interandean Belt 50 km northeast of Sucre. Trace fossils can be assigned to five associations from nearshore to offshore environments (namely Skolithos, Diplocraterion, Altichnus, Palaeophycus, and Zoophycos associations). They clearly illustrate the different colonization phases of the benthos with increasing marine influence. A deeper-water Helminthopsis association occurs in other complementary sections on the Eastern Cordillera. Variation of bioturbation intensity, ichnodiversity, and preservation potential is evaluated. The morphology of traces, mainly deep burrows, shows a significant gradient related to the behavior of tracemakers and the environmental changes. Main trends are consistent with the Seilacherian bathymetric model which is detailed here and/or emended with a well-exposed field example. A precise correlation is proposed with fossil benthic associations dominated by brachiopods. The whole gives an accurate model for benthos colonization and benthic marine zonation
(Journal of Paleontology. vol. 80, n° 0022-3360, pp. 1205-1226, 26/08/2026)
PEPS, UCBL, INSU - CNRS, CNRS, LDO, INSU - CNRS, UBO EPE, CNRS
Metallothionein gene identification and expression in the cockle ( Cerastoderma edule) under parasitism (trematodes) and cadmium contaminations
Among benthic organisms, bivalves are often used as bioindicators of environmental pollution because of their high bioaccumulation capacities for heavy metals leading to metallothioneins (MT) induction. MT are small cytosolic metal-binding proteins involved in metal homeostasis and detoxification in living organisms. These proteins can also be induced by a wide range of factors, such as hormones, physical stress, parasitism. MT quantification in relation to parasitism is rarely reported in literature, while parasites are omnipresent and have deleterious impacts on bivalves. Moreover, only a few number of MT genes have been characterized in molluscs. This study describes the partial sequence of the MT gene (Cemt1) in the edible cockle Cerastoderma edule. The cockle's MT cDNA was sequenced and showed over 80% homology to several other bivalve MT sequences. This sequence was then used to determine MT specific primers which can be used in quantitative real time PCR. MT protein and gene expression levels were quantified for individuals selected under different conditions: free from or infected by the digenean trematode Himasthla elongata, and under cadmium exposure at 15 mu g Cd L-1. Results evidenced that MT concentrations were significantly increased by both treatments; parasite infection and Cd exposure. Moreover, congruent results between MT protein and gene expression levels were obtained.
(Aquatic Living Resources. vol. 20, n° 0990-7440, pp. 43-49, 26/08/2026)
EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS
DNA adduct measurements in zebra mussels, Dreissena polymorpha Pallas. Potential use for genotoxicant biomonitoring of fresh water ecosystems
(Aquatic Toxicology. vol. 79, n° 0166-445X, pp. 55-64, 26/08/2026)
ANTICIPE, UNICAEN, NU, CHU Caen Normandie, NU, UNICANCER/CRLC, NU, INSERM, UNICANCER/CRLC, NU, UB, UB, GRECAN, UNICAEN, NU, UNICANCER/CRLC, NU, ABTE, UNICAEN, NU, UNIROUEN, NU, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS
Le tuf de Caours (Somme, France) : mise en évidence d'une séquence eemienne et d'un site paléolithique associé
Les nouvelles investigations menées sur les tufs du bassin de la Somme dans le cadre du programme SITEP (CNRS) ont permis de mettre en évidence une formation tufacée reposant sur une nappe alluviale en position de très basse terrasse à Caours (Scardon). La séquence de tufs est sé-parée de la nappe alluviale périglaciaire sous-jacente par des limons fluviatiles calcaires se terminant par un petit sol de marais coiffé par un liseré de tourbe compactée. La formation tufacée proprement dite comporte essentiellement des faciès palustres à nombreux restes végétaux encroûtés en place et des concrétions travertineuses de type stromatolithes. En direction de la vallée actuelle l'ensemble passe rapidement à des faciès nettement fluviatiles à oncolithes structurés en grandes lentilles à stratifications obliques. La séquence de tuf ainsi que les limons fluviatiles ont livré une abondante faune malacologique qui a permis de décrire une évolution climatique contemporaine des phases initiales d'un interglaciaire, suivi d'un optimum climatique, puis d'une phase de réouverture du milieu exprimant le déclin des conditions tempérées. La base du tuf comporte plusieurs horizons organiques qui ont livré des restes de grands mammifères et de rongeurs contemporains de l'optimum interglaciaire déterminé par les assemblages malacologiques. Dans ces horizons, plusieurs niveaux du Paléolithique moyen ont été découverts en place, en association avec des restes de grande faune interglaciaire fortement fracturés par l'action de l'homme et présentant des traces de découpe. Compte tenu de sa position dans le sys-tème de la Somme, des datations par U/Th obtenues sur le tuf (moyenne : ± 120 ka BP) et des conclusions des études bioclimatiques, la séquence de Caours représente le premier témoin de l'interglaciaire Eemien en contexte fluviatile dans le bassin de la Somme. Enfin, les niveaux archéologiques découverts à Caours constituent un exemple unique d'occupation humaine contemporaine du dernier interglaciaire dans la France septentrionale.
(Quaternaire. vol. 17, n° 1142-2904, pp. 281--320, 26/08/2026)
LGP, UP1, UPEC UP12, CNRS, Evo-Eco-Paléo (EEP), CNRS, Inrap, PEQENO, CNRS, GEOTOP, EPM, UdeM, UQAT, UQAR, UQAM, LSCE, UVSQ, INSU - CNRS, CNRS, DRF (CEA), CEA, OCEANIS, LSCE, UVSQ, INSU - CNRS, CNRS, DRF (CEA), CEA, HQMC, MNHN, CNRS, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, IRAMAT, UTBM, UO, UBM, CNRS, GEOTRAC, LSCE, UVSQ, INSU - CNRS, CNRS, DRF (CEA), CEA, MNHN, CNRS