Publications

Publications

Publications

Publications

Publications

Publications

Publications

Publications

Crotalia jafari: a new weakly calcified holococcolithophore genus and species from the Southwest Indian Ocean

Shramik Patil, Rahul Mohan, Sahina Gazi, Pooja Ghadi, Xavier Crosta

We here describe a distinctive weakly calcified holococcolithophore Crotalia jafari gen. et sp. nov. from the Southwest Indian Ocean phytoplankton. The coccospheres of Crotalia jafari measure 8–15 ?m in diameter, and possess 430–538 coccoliths, with each coccolith measuring less than 1 ?m in diameter. The coccoliths are tightly attached to each other by an organic layer. Their central area appears open. Finger-shaped extensions are present in the peripheral coccoliths, and stretch from the hexagonal surface layer towards the basal plate. The basal plate is flat and composed of irregular wall fabric. The crystallites of the coccoliths are small. These morphological features make this holococcolithophore unique among the extant and fossil coccolithophores. The described species is therefore placed into the new genus ‘Crotalia’. This study also suggests that high diversity of weakly calcified (and still undescribed) holo- and heterococcolithophores may exist in the Southern Ocean, which requires additional careful observation.

(Micropaleontology. vol. 71, n° 0026-2803, pp. 101-108, 01/01/2025)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

The Late Pleistocene - Holocene meandering lower Garonne River, southwest France: Architecture of the valley fill and chronology, comparison with other European rivers

Pascal Bertran, Eric Andrieux, Sophie Leleu, Zoé Sicard-Delage, Rachid Ouchaou, Pierre Weill, Jean-Yves Reynaud

The architecture and chronology of Late Pleistocene to Holocene alluvial deposits in the lower Garonne have been studied in details based on data (boreholes, trenches, ground-penetrating radar profiles, numerical dating) collected in quarries and during archaeological surveys. The preserved alluvial bodies, dated between ca. 38 ka and present, show that the river retained a meandering or anabranching pattern throughout this period, associated with the formation of lateral accretion packages and scroll bars in the convexity of meanders. Valley incision in connection to the LGM low sea level reached up to 19 m in the study area, and occurred between ca. 26 and 18 ka. Since ca. 18 ka, the lateral migration of meanders widened the plain without any significant incision of the Oligocene marl bedrock. The Early-Middle Holocene was characterized by the development of highly sinuous meanders, while sinuosity decreased in a late phase including the Little Ice Age. Comparison with other lowland European rivers shows that the persistence of a meandering or anabranching pattern during MIS 2 is not an isolated case. The documented examples are associated with rivers typified by low valley slope, or situated in southern regions unaffected by permafrost and characterized by dense vegetation. The latter conditions would not have led to a drastic change in river discharge and bedload transport during the Last Glacial, as was the case for more northerly rivers where braiding seems to have been common.

(Geomorphology. vol. 468, n° 0169-555X, pp. 109469, 01/01/2025)

Inrap, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, UNIROUEN, NU, IDEES, UNICAEN, NU, ULH, NU, UNIROUEN, NU, CNRS, IRIHS, UNIROUEN, NU, BRGM, LOG, INSU - CNRS, ULCO, CNRS, IRD [Ile-de-France], M2C, UNICAEN, NU, INSU - CNRS, UNIROUEN, NU, CNRS

Active biomonitoring of river pollution using an ex-situ exposure system with two model species

Sarah Bancel, Olivier Geffard, Cécile Bossy, Christelle Clérandeau, Alexandra Coynel, Flore Daramy, Nicolas Delorme, Laura Garnero, Nicolas Mazzella, Débora Millan-Navarro, Fatima Mzali, Fabien Pierron, Rémi Recoura-Massaquant, Eric Rochard, Jérôme Cachot

In the context of increasing pollution pressure on aquatic ecosystems, it is essential to improve our knowledge of habitat quality and its suitability for organisms. It is particularly relevant to better integrate early life stages of fish into pollution biomonitoring programs, as they are reliable indicators of ecosystem integrity and because of their high sensitivity to pollutants. To avoid the influence of environmental parameters on their development, a lab-on-field approach, called the ex-situ exposure method, was developed. Aquatic organisms were exposed to a continuous flux of water under semi-controlled temperature, oxygen, and photoperiod conditions to avoid the influence of these confounding factors when interpreting the results. To investigate the potential role of water contamination, this active biomonitoring method was applied to the Garonne River (Southwest France), where migratory fish populations have declined. Two model species from different taxa were used: embryos of the Japanese medaka (Oryzias latipes) and adults of the crustacean Gammarus fossarum. The results showed a significant impact of water quality on embryo mortality and early hatching in two separate experiments on Japanese medaka. In addition, an induction of feeding rate was observed in exposed gammarids, but no impact on their embryo survival, suggesting differences in sensitivity between the two species selected. Chemical and biological analyses did not identify trace metals, pesticides, or microorganisms as potential sources of toxicity in medaka embryos or G. fossarum. These results raise concerns about the quality of the water in the Garonne River and its toxicity to aquatic organisms.

(Science of the Total Environment. vol. 959, n° 0048-9697, pp. 178159, 01/01/2025)

UR EABX, INRAE, RiverLy, INRAE, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, MFP, UB, CNRS

Toxicity assessment of DMSO extracts of environmental aged beached plastics using human cell lines

Florane Le Bihanic, Bettie Cormier, Emilie Dassié, Sophie Lecomte, Justine Receveur, Stéphane Le Floch, Jérôme Cachot, Bénédicte Morin

Plastic products contain complex mixtures of chemical compounds that are incorporated into polymers to improve material properties. Besides the intentional chemical additives, other compounds including residual monomers and non-intentionnaly added substances (NIAS) as well as sorbed pollutants are usually also present in aged plastic. Since most of these substances are only loosely bound to the polymer via non-covalently interactions, i.e., van der Waals forces, they may leach to the surrounding environment. Although there is increasing knowledge about toxicity of weathered plastic to aquatic organisms, only little is known about how plastic associated chemicals affect human health. Seafood consumption is one of the routes of human exposure to microplastics. The aim of this study was to evaluate the ability of naturally aged plastic associated chemicals to induce harmful effects to human health via the consumption of MP-contaminated seafood. Human colorectal adenocarcinoma Caco-2 and human hepatocyte carcinoma HepG2 cells were selected as model of the colon and liver cells respectively. They are known for their high capacity to metabolize organic contaminants. Both cell lines were exposed to DMSO extracts of different plastics to investigate the effects of chemicals on cell viability, oxidative stress induction and genotoxicity. In addition, the estrogenic effects of DMSO-extracts were evaluated using an estrogen-dependent reporter gene assay in T47D-Kbluc human breast cancer cells. Chemical profiles of the DMSO extracts were polymer-dependent, with polyvinyl chloride (PVC) highly contaminated with metals while polypropylene (PP) contained the lowest concentration of metals. Organic pollutants, including polycyclic aromatic hydrocarbons, were mainly found in PVC, high density polyethylene (HDPE) and PP extracts, whereas other extracted plastics had less (PP) to no organic contamination (polyethylene terephthalate PET). PVC was the most toxic plastic inducing cytotoxicity for both cell lines. DNA damage was observed for Caco-2 cells exposure to HDPE, PVC and nylon. Reactive oxygen species were induced only with nylon extracts in intestinal cells. No toxicity was observed for PP and PET and none of the tested plastics had any estrogenic effect. Our results demonstrate that some environmental aged plastic material released a variety of known and unknown chemical compounds some of which are toxic in vitro and contribute to the knowledge on adverse human health effects of plastics.

(Ecotoxicology and Environmental Safety. vol. 289, n° 0147-6513, pp. 117604, 01/01/2025)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, CBMN, UB, ENITAB, INC-CNRS, CNRS, Cedre

Phases of Magmatism and Tectonics Along the Madagascar‐Comoros Volcanic Chain, and Synchronous Changes in the Kinematics of the Lwandle and Somalia Plates

Anaïs Rusquet, Vincent Famin, Laurent Michon, Xavier Quidelleur, François Nauret, Martin Danišík, Gilles Ruffet, Carole Berthod, Sidonie Revillon, Patrick Bachèlery, Isabelle Thinon, Anne Lemoine, Sylvie Leroy, Sébastien Zaragosi, Simon Thivet, Julien Bernard, Loraine Gourbet, Etienne Médard, Alix Toulier

This paper aims to solve the longstanding debate on the origin of the Comoros volcanic archipelago (Mozambique Channel, Indian Ocean) concerning whether it represents a hotspot trail or a boundary between the Lwandle and Somalia plates in possible connection with the East African Rift System (EARS). To achieve this goal, we analyzed rock samples from recently discovered and previously uninvestigated volcanoes and edifices by means of geochemistry and geochronology. Major-trace element analyses and radiometric dating ( 40 Ar/ 39 Ar, K-Ar, and (U-Th)/He) allow us to identify a widespread phase of Comorian volcanism initiated at 9-8 Ma, involving the Zélée, Geyser, and Leven banks, three atolls east of the Comoros. Another tectono-magmatic phase initiated at 2.5 Ma led to a N-S widening of seamount volcanism, and to the progressive development of en-échelon NW-SE structures. With this new addition of atolls and seamounts, the Comoros Archipelago becomes a ∼700 km-long, ∼200 km-wide E-W chain extending from the Cenozoic volcanoes of Madagascar to the EARS. The reactivation of this chain at 9-8 and 2.5 Ma coincides with abrupt changes in the motion of the Somalia plate relative to the Lwandle plate, and with plate boundary modifications. The en-échelon reorganization of structures also matches the kinematic evolution of Somalia relative to Lwandle, from transtension (>3 Ma) to pure dextral slip (≤3 Ma) in the northern Mozambique Channel. We conclude that the Madagascar-Comoros volcanic chain is a branch of the EARS and a plate boundary, further strengthening the link between magmatism and the Rovuma-Lwandle-Somalia plate kinematics

(Journal of Geophysical Research : Solid Earth. vol. 130, n° 2169-9313, pp. e2024JB029488, 01/01/2025)

IPG Paris, UR, LGSR, UR, IPG Paris, IPGP - UMR_7154, INSU - CNRS, IGN, UR, IPG Paris, CNRS, UPCité, GEOPS, INSU - CNRS, CNRS, LMV, IRD, INSU - CNRS, CNRS, UCA, GR, UR, INSU - CNRS, CNRS, OVSG, IPG Paris, GEO-OCEAN, UBS, IFREMER, INSU - CNRS, UBO EPE, CNRS, BRGM, SU, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, UNIGE, GFZ, UHM

Investigation of critical copper release rates for dose optimization of antifouling coatings

Maria Lagerström, Marcel Butschle, Ann I Larsson, Jérôme Cachot, Kim Dam-Johansen, Markus Schackmann, Florane Le Bihanic

Antifouling coatings are applied to ship and boat hulls to prevent the unwanted attachment of marine organisms known as biofouling. Most antifouling coatings do so through toxic means by continuously releasing copper from the paint film to the surrounding water and are thus of environmental concern. Few studies have investigated the minimum dose of copper from an antifouling coating required to inhibit biofouling, commonly referred to as the critical release rate. This study presents a comprehensive investigation into the critical release rates of copper from commercial antifouling coatings in European coastal waters, with study sites in the Atlantic (Arcachon, France), Kattegat (Hundested, Denmark) and Skagerrak (Tjärnö, Sweden). Employing a combination of X-ray Fluorescence (XRF) analysis and visual inspection, this six-month field study has evaluated the efficacy of various antifouling coatings with differing copper contents. The findings of this study indicate that a release rate of 7 μg cm -2 d -1 was sufficient to inhibit macrofoulers at all three sites during static conditions. Results also indicate that the critical release rate is a parameter that coating manufacturers can optimize, as the performance of the coatings was not solely dependent on the copper release rates. The general critical release rate of 7 μg cm -2 d -1 could serve as a benchmark for dose optimization of coatings for both the yacht and ship sectors in the studied waters to reduce their environmental impact. It can also be used as support for decision-makers to phase out coatings with unnecessarily high copper release rates from the market.

(Progress in Organic Coatings. vol. 198, n° 0300-9440, 01/01/2025)

DTU, GU, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, UB, OFB - DR NAQ, OFB

Main conclusions and perspectives from the collective scientific assessment of the effects of plant protection products on biodiversity and ecosystem services along the land–sea continuum in France and French overseas territories

Stéphane Pesce, Laure Mamy, Wilfried Sanchez, Marcel Amichot, Joan Artigas, Stéphanie Aviron, Carole Barthélémy, Rémy Beaudouin, Carole Bedos, Annette Bérard, Philippe Berny, Cédric Bertrand, Colette Bertrand, Stéphane Betoulle, Ève Bureau-Point, Sandrine Charles, Arnaud Chaumot, Bruno Chauvel, Michael Coeurdassier, Marie-France Corio-Costet, Marie-Agnès Coutellec, Olivier Crouzet, Isabelle Doussan, Juliette Fabure, Clémentine Fritsch, Nicola Gallai, Patrice Gonzalez, Véronique Gouy-Boussada, Mickael Hedde, Alexandra Langlais, Fabrice Le Bellec, Christophe Leboulanger, Christelle Margoum, Fabrice Martin-Laurent, Rémi Mongruel, Soizic Morin, Christian Mougin, Dominique Munaron, Sylvie Nélieu, Céline Pélosi, Magali Rault, Sergi Sabater, Sabine Stachowski-Haberkorn, Elliott Sucré, Marielle Thomas, Julien Tournebize, Sophie Leenhardt

Preservation of biodiversity and ecosystem services is critical for sustainable development and human well-being. However, an unprecedented erosion of biodiversity is observed and the use of plant protection products (PPP) has been identified as one of its main causes. In this context, at the request of the French Ministries responsible for the Environment, for Agriculture and for Research, a panel of 46 scientific experts ran a nearly 2-year-long (2020-2022) collective scientific assessment (CSA) of international scientific knowledge relating to the impacts of PPP on biodiversity and ecosystem services. The scope of this CSA covered the terrestrial, atmospheric, freshwater, and marine environments (with the exception of groundwater) in their continuity from the site of PPP application to the ocean, in France and French overseas territories, based on international knowledge produced on or transposable to this type of context (climate, PPP used, biodiversity present, etc.). Here, we provide a brief summary of the CSA's main conclusions, which were drawn from about 4500 international publications. Our analysis finds that PPP contaminate all environmental matrices, including biota, and cause direct and indirect ecotoxicological effects that unequivocally contribute to the decline of certain biological groups and alter certain ecosystem functions and services. Levers for action to limit PPP-driven pollution and effects on environmental compartments include local measures from plot to landscape scales and regulatory improvements. However, there are still significant gaps in knowledge regarding environmental contamination by PPPs and its effect on biodiversity and ecosystem functions and services. Perspectives and research needs are proposed to address these gaps.

(Environmental Science and Pollution Research. vol. 32, n° 0944-1344, pp. 2757–2772, 11/07/2026)

RiverLy, INRAE, ECOSYS, INRAE, IFREMER, ISA, UNS, CNRS, INRAE, UniCA, LMGE, CNRS, UCA, UMR BAGAP, ESA, INRAE, Institut Agro, LPED, IRD, AMU, INERIS, EMMAH, AU, INRAE, VAS, ICE, VAS, CRIOBE, UPVD, EPHE, PSL, CNRS, SEBIO, INERIS, URCA, ULH, NU, URCA, CNRS, CNELIAS, AU, AMU, MMSH, AMU, CNRS, CNRS, LBBE, UCBL, VAS, CNRS, LBBE, UCBL, VAS, CNRS, INRAE, Institut Agro, UBE, LCE, CNRS, UMLP, UBFC, UMR SAVE, UB, Bordeaux Sciences Agro, INRAE, DECOD, IFREMER, INRAE, Institut Agro, Institut Agro, OFB Service Santé Agri, OFB - DRAS, OFB, GREDEG, UNS, CNRS, UniCA, ENSFEA, LEREPS, UT Capitole, Comue de Toulouse, UT2J, Comue de Toulouse, ENSFEA, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, UMR Eco&Sols, Cirad, IRD, INRAE, Institut Agro, IODE, UR, CNRS, UPR HORTSYS, Cirad, Cirad-PERSYST, Cirad, UMR MARBEC, IRD, IFREMER, CNRS, UM, AMURE, IRD, IFREMER, UBO EPE, CNRS, UR EABX, INRAE, IMBE, AU, AMU, CNRS, UdG, PHYTOX, IFREMER, CUFR, URAFPA, UL, INRAE, UR HYCAR, INRAE, DEPE, INRAE

Manila clam (Ruditapes philippinarum) in France: Fishing activity, governance and present knowledge challenges regarding its biology and ecology

Nathalie Caill-Milly, Florence Sanchez, Muriel Lissardy, Noëlle Bru, Claire Kermorvant, Xavier de Montaudouin, Sylvie Lapègue, Florentine Riquet, Ludovic Bouché, Céline d'Hardivillé, Franck Lagarde, Aurélie Chambouvet, Nicolas Mayot, Jean-Claude Dauvin, Jean-Philippe Pezy, Olivier Basuyaux, Anthony Guéguen, Yohan Weiller, Isabelle Arzul, Christine Paillard, Caitriona Carter

Originally introduced to France in the 1970s for aquaculture purposes, the clam Ruditapes philippinarum (Adam and Reeve, 1850) has thrived in favourable conditions across numerous sites along the Bay of Biscay, English Channel and Mediterranean coasts forming neo-naturalized populations. It is harvested by both recreational and professional fishers, with an estimated production ratio of 2.4 for both activities combined. Total French commercial fishing production is roughly estimated at around 2000 to 3000 tons per year. This activity is managed by three types of regulation at different scales: European (Minimum Conservation Reference Size - MCRS), national (licenses), and regional. Regional instruments govern fishing practices by setting spatial and temporal access rules to fishing grounds (also referred to as deposits), prohibiting certain gear types at the local scale, determining the minimum size of clam fishing (above MCRS) and setting fishing quotas. Not all of them are implemented everywhere; most often, they are based on stock assessment results and specific research programs, which are not available in every location. This article first provides a review of available information on current Manila clam production in France, and its regulation. Second, it offers an overview of recent knowledge mobilized for management purposes. This overview covers biological and ecological processes (i.e. population dynamics, reproduction and spawning, habitats considerations, biotic interactions and infectious diseases), and enables us to identify future research prospects of interest.

(Estuarine, Coastal and Shelf Science. vol. 317, n° 0272-7714, pp. 109206, 11/07/2026)

LERAR, COAST, IFREMER, LMAP, UPPA, CNRS, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, UMR MARBEC, IRD, IFREMER, CNRS, UM, ASIM, IFREMER, DECOD, IFREMER, INRAE, Institut Agro, Institut Agro, SBR, SU, CNRS, AD2M, SU, CNRS, SBR, SU, CNRS, LOV, INSU - CNRS, SU, CNRS, IMEV, INSU - CNRS, SU, CNRS, M2C, UNICAEN, NU, INSU - CNRS, UNIROUEN, NU, CNRS, SMEL, LEMAR, IRD, IFREMER, UBO EPE, CNRS, UR ETTIS, INRAE

Biological features for a minimum conservation reference size revision – case of Ruditapes philippinarum in Arcachon Bay (French Atlantic coast)

N. Caill-Milly, Noëlle Bru, Xavier de Montaudouin, C. Dang, T. Briaudeau, F. Sanchez

The Minimum Conservation Reference Size (MCRS) for marine resources ensure that individuals can mature and reproduce at least once before being caught. For management purposes, MCRS should be revised for specific populations in given areas. In Arcachon Bay (southwest France), fishers have repeatedly requested a review of the MCRS for R. philippinarum. In 2020, a joint recommendation, supported by France, was addressed to the European Commission suggesting a possible reduction in the MCRS of R. philippinarum from 35 mm to 32 mm for Arcachon Bay. This paper provides an overview of the biological features that need to be considered to support such a review, primarily focusing on sexual maturity, individual growth and natural mortality. The reproductive cycle and size at first maturity, estimated at 26.7 mm for the Bay, were found to be similar to other locations in France and in Portugal. The greatest length at which growth slowdown occurred ranges between 24.0 and 31.5 mm with few differences among sites and no significant differences within each site (at hypsometric levels). The natural mortality coefficients were high with 0.67 yr−1 and 0.51 yr−1 for juveniles and adults, respectively. Regarding productivity (resulting from growth and mortality processes) and all methods combined, the optimal balance between individual growth and natural mortality above 30 mm was found at a mean length of 32.2 mm for the intra-lagoon sites and at a mean length of 36.8 mm for the oceanic sites. Based on available information, reducing the MCRS to 32 mm would not threaten population viability. However, the European Commission has raised warning points, which are discussed in light of current regulations in Arcachon Bay.

(Estuarine, Coastal and Shelf Science. vol. 320, n° 0272-7714, pp. 109288, 11/07/2026)

LMAP, UPPA, CNRS, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

Machine Learning Beach Attendance Forecast Modelling from Automatic Video-Derived Counting

Bruno Castelle, David Carayon, Jeoffrey Dehez, Sylvain Liquet, Vincent Marieu, Nadia Sénéchal, Sandrine Lyser, Jean-Philippe Savy, Stéphanie Barneix

Accurate predictions of beach user numbers are important for coastal management, resource allocation, and minimising safety risks, especially when considering surf-zone hazards. The present work applies an XGBoost model to predict beach attendance from automatically video-derived data, incorporating input variables such as weather, waves, tide, and time (e.g., day hour, weekday). This approach is applied to data collected from Biscarrosse Beach during the summer of 2023, where beach attendance varied significantly (from 0 to 2031 individuals). Results indicate that the optimal XGBoost model achieved high predictive accuracy, with a coefficient of determination (R2) of 0.97 and an RMSE of 70.4 users, using daily mean weather data, tide and time as input variables, i.e., disregarding wave data. The model skilfully captures both day-to-day and hourly variability in attendance, with time of day (hour) and daily mean air temperature being the most influential variables. An XGBoost model using only daily mean temperature and hour of the day even shows good predictive accuracy (R2 = 0.90). The study emphasises the importance of daily mean weather data over instantaneous measurements, as beach users tend to plan visits based on forecasts. This model offers reliable, computationally inexpensive, and high-frequency (e.g., every 10 min) beach user predictions which, combined with existing surf-zone hazard forecast models, can be used to anticipate life risk at the beach.

(Journal of Marine Science and Engineering. vol. 13, n° 2077-1312, pp. 1181, 11/07/2026)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, UR ETTIS, INRAE, UR EABX, INRAE, EPOC, SMGBL