Publications

Publications

Publications

Publications

Publications

Publications

Publications

Publications

Messinian palaeoenvironments and hydrology in Sicily (Italy): The dinoflagellate cyst record

Laurent Londeix, Mohamed Benzakour, Jean-Pierre Suc, Jean-Louis Turon

Hydrological conditions prevailing before, during and after the Messinian salinity crisis in Sicily have been approached using dinoflagellate cyst records. The synthetic sequence considered is based on five classical sections from the Caltanissetta Basin. Our interpretations are based on the recognition of autochthonous, allochthonous and reworked population among the dinocyst assemblages. For the first time, sea-surface temperatures and seasonal salinity contrastswere tentatively reconstructed using a ‘‘Mutual Climatic RangeMethod''. Sicilian lateTortonian deposits correspond to marine environment with significant terrestrial inputs favourable to eutrophic dinocyst species. Immediately after the beginning of the Messinian Stage, euryhaline assemblages took place, followed bymeso-hyperhaline taxa,within a general trend to shallowing.At the end of the Tripoli diatomitic Formation, environment appears confined, with regular oceanic inflows. Such marine inflows remain persistent during the deposition of the salt Member, witnessing the probable persistence of nearby normal marine sea-surface water conditions in the Mediterranean Sea but with possible reduced hydrological circulation and/or lownutrient component. Such inflows are slightly decreasing up to the top of the Sicilian Upper Evaporites. At the same time, river inputs appearweak during the salt deposition, as the consequence of a rather dry climatic context.As shown by reworking activity, terrestrial inputs increase progressively fromthe base of the Upper Evaporites.During the Lago Mare period,while climate remains rather dry (absence of freshwater algae inputs, very low amount in trees requiring humid conditions), local deposition environment is confined with mesohaline to hypohaline sea-surfacewaters, in a context with relatively high seasonal sea-surface salinity contrast (up to 6%). The very high reworking observed in the Arenazzolo silts, in addition to slightly increasing water depth, led us to consider the presence of a discontinuity between the Lago Mare and the Arenazzolo Fms.We consider the Arenazzolo Formation as a transgressive facies following a deep downcutting period. The Arenazzolo Formation presents a two-step development. The first one, correlative with the presence of a G. etrusca (a species with Paratethyan affinities), corresponds to a relative high-stand sea-level with oceanic influxes, low seasonal sea-surface salinity contrast and probable more humid context, as revealed by the important freshwater algal inputs. During the second step, salinity becomes much more variable, with a clear increase of seasonal sea-surface salinity contrast, a possible slight mean sea-surface temperature increase (only few degrees) and a clear weakening of the river inputs. Taking the proposed Zanclean position of the Arenazzolo Fm. into consideration, we state that mean sea-surface temperature did not change significantly fromthe base of the Messinian to the earliest Zanclean. At 5.33 Ma, the suddenly achieved flooding restored a fair, deep oceanic environment characterized, at the beginning, by a clear mean sea-surface temperature cooling (up to 6–7°C) and a nutrient depletion, associated with the basins starvation. Sea-surface salinitieswere normal, with very lowseasonal contrast. Hydrodynamics then nutrient supply became then quite normal fromc.a. 5.08 Ma.The status of the SicilianCaltanissettaBasin as amarginal basin although fastly deepening and the stratigraphical location of the Messinian discontinuity at the base of the Arenazzolo is the scenario that best matches our dinocyst record.

(Geobios. vol. 40, n° 0016-6995, pp. 233-250, 22/02/2026)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, UM5, PEPS, UCBL, INSU - CNRS, CNRS

Vegetation dynamics in southern France during the last 30 ky BP in the light of marine palynology

Célia Beaudouin, Gwenael Jouet, Jean-Pierre Suc, Serge S. Berné, Gilles Escarguel

The composition of the glacial vegetation of southern French plains has been a matter of debate for several decades. Vegetation is considered as steppic according to French and Spanish lacustrine pollen records whereas cave deposits suggest the presence of mesothermophilous trees through the Last Glacial Maximum. In our paper, we display new palynological records from marine sediments of the Gulf of Lions. They indicate the presence of Abies, Picea and deciduous Quercus in the Gulf of Lions, certainly located in the drainage basins of the Pyreneo-Languedocian rivers. These populations that were sensitive to short climatic events during Marine Isotopic Stage 2 could have been linked to northeastern Spanish and southeastern French relicts already evidenced by phylogenetic data. These trees were absent from the Rhone drainage basin during the deglaciation and certainly also disappeared from the Pyreneo- Languedocian drainage basins from ca 17 to 15 ky cal BP. Finally, the Last Glacial Maximum does not appear as stable, cold and dry as previously thought.

(Quaternary Science Reviews. vol. 26, n° 0277-3791, pp. 1037-1054, 22/02/2026)

PEPS, UCBL, INSU - CNRS, CNRS, SYSU, LDO, INSU - CNRS, UBO EPE, CNRS, GM, IFREMER

Processus sédimentaires et activité de la Veine d'Eau Méditerranéenne au cours du Quaternaire terminal dans le Golfe de Cadix

Vincent Hanquiez

Cette thèse représente une étude pluridisciplinaire des dépôts actuels et anciens dans la partie orientale du Golfe de Cadix afin d'améliorer la compréhension de la dynamique de la MOW et de caractériser les forçages à l'origine des variations sédimentaires observées depuis le Pléistocène terminal. Le schéma de circulation actuel est parfaitement conforme à la distribution des faciès sédimentaires et montre l'omniprésence des cicatrices de glissement. La morphologie du fond marin et la force de Coriolis exercent un contrôle important sur l'orientation et l'intensité des différentes branches de la MOW. La diminution de la vitesse et de la compétence de cet écoulement vers l'Ouest s'accompagne d'une diminution de la granularité des dépôts. L'étude chronostratigraphique et sismique permet de contraindre dans le temps et l'espace la mise en place des séquences contouritiques. Le climat est un facteur de contrôle majeur de la sédimentation des 50 000 dernières années. Associées aux fluctuations climatiques hautes fréquences, les variations glacio-eustatiques apparaissent responsables du changement important des conditions de sédimentation mis en évidence dès l'entrée dans l'interglaciaire actuel. Enfin, la mise en place polyphasée des systèmes chenal-lobes situés au débouché des chenaux contouritiques montre l'interaction entre les processus contouritiques et les processus gravitaires. L'activité de ces systèmes paraît contrôlée par la MOW, la morphologie du fond et les changements climatiques ayant affecté le Quaternaire terminal.

(19/12/2006)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

Shoreface migrations at the shelf edge and sea-level changes around the Last Glacial Maximum (Gulf of Lions, NW Mediterranean)

Gwenael Jouet, Serge S. Berné, Marina Rabineau, Maria-Angela Bassetti, P. Bernier, B. Dennielou, F.J. Sierro, J.A. Flores, M. Taviani

The Bourcart–Hérault canyon interfluve in the Gulf of Lions (NW Mediterranean) was the site of very high sedimentation (up to 2.5 m/kyr) around the Last Glacial Maximum, due to the vicinity of major fluvial systems that fed the shelf edge. Shoreface deposits and offshore muds deposited during each glacial/interglacial 100 kyr-cycle, created a repeated motif with high-angle and low-angle clinoforms on seismic profiles. New detailed morphological, sedimentological and paleo-environmental data, constrained by 14C dating, allow us to propose a scenario for the evolution of this critical area between 46 and 15 cal. kyr BP. The major seismic sequence (S5), formed as a forced regression during the overall sea-level fall between MIS-3 and MIS-2, can be sub-divided into several prograding units, which indicate that relative sea-level changes were punctuated by intervals of increased fall or slow-down, or even stillstand. Similarly, the onset of sea-level rise was marked by steps, during which wave-cut terraces formed, and can be tracked all around the Gulf of Lions. Three stillstands or slow-downs of sea-level change are identified and dated by deposits found at 90 m relative sea-level (21 cal. kyr BP), 110–115 m rsl (18–17 cal. kyr BP), and 98–105 m rsl (before 15.9 cal. kyr BP). Cementation of beach rocks, that now form eroded pinnacles culminating at 90 m, occurred during the 21 kyr stillstand. The position of relative sea-level during the maximum lowstand is not known, but should be deeper than 115 m. Periods of increased northwesterly winds favoured transport of coarser sediment at the shelf edge, in relation with deep water cascading: this created a distinct sandy interval during the period of Heinrich event 2 (around 24 cal. kyr BP), at the origin of amplitude anomaly on very high-resolution seismic data. The increased sea-level rise, around 15 cal. kyr BP, resulted in an abrupt decrease of sedimentation.

(Marine Geology. vol. 234, n° 0025-3227, pp. 21-42, 06/12/2006)

LDO, INSU - CNRS, UBO EPE, CNRS, GM, IFREMER, PEPS, UCBL, INSU - CNRS, CNRS, ISMAR, ISMAR, CNR

The impact of the last European deglaciation on the deep-sea turbidite systems of the Celtic-Armorican margin (Bay of Biscay)

Sébastien Zaragosi, Jean-François Bourillet, Frédérique Eynaud, Samuel Toucanne, Benjamin Denhard, Aurélie van Toer, Valentine Lanfumey

(Geo-Marine Letters. vol. 26, n° 0276-0460, pp. 317-329, 22/11/2006)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, IFREMER, LSCE, UVSQ, INSU - CNRS, CNRS, DRF (CEA), CEA, CLIMAG, LSCE, UVSQ, INSU - CNRS, CNRS, DRF (CEA), CEA

The genome of the sea urchin Strongylocentrotus purpuratus.

Erica Sodergren, George M Weinstock, Eric H Davidson, R Andrew Cameron, Richard A Gibbs, Robert C Angerer, Lynne M Angerer, Maria Ina Arnone, David R Burgess, Robert D Burke, James A Coffman, Michael Dean, Maurice R Elphick, Charles A Ettensohn, Kathy R Foltz, Amro Hamdoun, Richard O Hynes, William H Klein, William Marzluff, David R Mcclay, Robert L Morris, Arcady Mushegian, Jonathan P Rast, L Courtney Smith, Michael C Thorndyke, Victor D Vacquier, Gary M Wessel, Greg Wray, Lan Zhang, Christine G Elsik, Olga Ermolaeva, Wratko Hlavina, Gretchen Hofmann, Paul Kitts, Melissa J Landrum, Aaron J Mackey, Donna Maglott, Georgia Panopoulou, Albert J Poustka, Kim Pruitt, Victor Sapojnikov, Xingzhi Song, Alexandre Souvorov, Victor Solovyev, Zheng Wei, Charles A Whittaker, Kim Worley, K James Durbin, Yufeng Shen, Olivier Fedrigo, David Garfield, Ralph Haygood, Alexander Primus, Rahul Satija, Tonya Severson, Manuel L Gonzalez-Garay, Andrew R Jackson, Aleksandar Milosavljevic, Mark Tong, Christopher E Killian, Brian T Livingston, Fred H Wilt, Nikki Adams, Robert Bellé, Seth Carbonneau, Rocky Cheung, Patrick Cormier, Bertrand Cosson, Jenifer Croce, Antonio Fernandez-Guerra, Anne-Marie Genevière, Manisha Goel, Hemant Kelkar, Julia Morales, Odile Mulner-Lorillon, Anthony J Robertson, Jared V Goldstone, Bryan Cole, David Epel, Bert Gold, Mark E Hahn, Meredith Howard-Ashby, Mark Scally, John J Stegeman, Erin L Allgood, Jonah Cool, Kyle M Judkins, Shawn S Mccafferty, Ashlan M Musante, Robert A Obar, Amanda P Rawson, Blair J Rossetti, Ian R Gibbons, Matthew P Hoffman, Andrew Leone, Sorin Istrail, Stefan C Materna, Manoj P Samanta, Viktor Stolc, Waraporn Tongprasit, Qiang Tu, Karl-Frederik Bergeron, Bruce P Brandhorst, James Whittle, Kevin Berney, David J Bottjer, Cristina Calestani, Kevin Peterson, Elly Chow, Qiu Autumn Yuan, Eran Elhaik, Dan Graur, Justin T Reese, Ian Bosdet, Shin Heesun, Marco A Marra, Jacqueline Schein, Michele K Anderson, Virginia Brockton, Katherine M Buckley, Avis H Cohen, Sebastian D Fugmann, Taku Hibino, Mariano Loza-Coll, Audrey J Majeske, Cynthia Messier, Sham V Nair, Zeev Pancer, David P Terwilliger, Cavit Agca, Enrique Arboleda, Nansheng Chen, Allison M Churcher, F. Hallböök, Glen W Humphrey, Mohammed M Idris, Takae Kiyama, Shuguang Liang, Dan Mellott, Xiuqian Mu, Greg Murray, Robert P Olinski, Florian Raible, Matthew Rowe, John S Taylor, Kristin Tessmar-Raible, D. Wang, Karen H Wilson, Shunsuke Yaguchi, Terry Gaasterland, Blanca E Galindo, Herath J Gunaratne, Celina Juliano, Masashi Kinukawa, Gary W Moy, Anna T Neill, Mamoru Nomura, Michael Raisch, Anna Reade, Michelle M Roux, Jia L Song, Yi-Hsien Su, Ian K Townley, Ekaterina Voronina, Julian L Wong, Gabriele Amore, Margherita Branno, Euan R Brown, Vincenzo Cavalieri, Véronique Duboc, Louise Duloquin, Constantin Flytzanis, Christian Gache, François Lapraz, Thierry Lepage, Annamaria Locascio, Pedro Martinez, Giorgio Matassi, Valeria Matranga, Ryan Range, Francesca Rizzo, Eric Röttinger, Wendy Beane, Cynthia Bradham, Christine Byrum, Tom Glenn, Sofia Hussain, Gerard Manning, Esther Miranda, Rebecca Thomason, Katherine Walton, Athula Wikramanayke, Shu-Yu Wu, Ronghui Xu, C Titus Brown, Lili Chen, Rachel F Gray, Pei Yun Lee, Jongmin Nam, Paola Oliveri, Joel Smith, Donna Muzny, Stephanie Bell, Joseph Chacko, Andrew Cree, Stacey Curry, Clay Davis, Huyen Dinh, Shannon Dugan-Rocha, Jerry Fowler, Rachel Gill, Cerrissa Hamilton, Judith Hernandez, Sandra Hines, Jennifer Hume, Laronda Jackson, Angela Jolivet, Christie Kovar, Sandra Lee, Lora Lewis, George Miner, Margaret Morgan, Lynne V Nazareth, Geoffrey Okwuonu, David Parker, Ling-Ling Pu, Rachel Thorn, Rita Wright

We report the sequence and analysis of the 814-megabase genome of the sea urchin Strongylocentrotus purpuratus, a model for developmental and systems biology. The sequencing strategy combined whole-genome shotgun and bacterial artificial chromosome (BAC) sequences. This use of BAC clones, aided by a pooling strategy, overcame difficulties associated with high heterozygosity of the genome. The genome encodes about 23,300 genes, including many previously thought to be vertebrate innovations or known only outside the deuterostomes. This echinoderm genome provides an evolutionary outgroup for the chordates and yields insights into the evolution of deuterostomes.

(Science. vol. 314, n° 0036-8075, pp. 941-52, 10/11/2006)

SBU, SUNY, AU, QMUL, CSIRO, CSIRO Energy Technology, CSIRO, MI, CATS, LSE, Jefferson Lab, LEMTA, UL, CNRS, LEGS, CNRS, UIUC, ECE, PSU, IAH, BBSRC, CAS, Ipsen, UC Berkeley, UC, ICAS, SEE, CAU, ACE-CRC, AER, TUM, MS, SBR, UPMC, CNRS, UPMC, CNRS, NPL, IRI, CAM, PCU, IMM, CNR, LAUM, UM, CNRS, ISL, CMU, DICP, CAS, ALCHEMY, LRI, UP11, CNRS, Inria, CATF, ISRO, CERAG, UPMF, CNRS, SQU, EMBL, UMich, Radonc, UMich, UVIC, LPL, AMU, CNRS, ISCR, UR, INSA Rennes, INSA, ENSCR, INC-CNRS, CNRS, SIE, USTB, LASP, SoMaS, LML, CNRS, CSD, UCLA, UC, DE, UP11, CNRS, LBDV, OOVM, UPMC, INSU - CNRS, CNRS, UPMC, CNRS, LPA, FRDPENS, ENS-PSL, PSL, CNRS, UPMC, UPD7, CNRS, CRUB, UNCOMA, BECP, UJF, CEA, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, IJM (UMR_7592), UPD7, CNRS, LNS, INFN, UAB, UAB, IOCAS, CAS, NCTU, HWR, SKL-NPT, ARC, DICORA, HUFS, RAL Space, RAL, STFC, IBCP, UCBL, CNRS, HMNAO, RAL, STFC, UCL, UCLA, UC, SEES, SNU, MMC, NTU, RQMP, EPM, UdeS, UdeM, FQRNT, UdeM, SEE, UKCEH, NERC, NIVA

Challenging the model for induction of metallothionein gene expression

Jean-Paul Bourdineaud, Magalie Baudrimont, Patrice Gonzalez, J.-L. Moreau

Metallothioneins (MTs) are low-molecular-weight, cysteine-rich metal-binding proteins found in a wide variety of organisms including bacteria, fungi and all eukaryotic plant and animal species. MTs bind essential and non-essential heavy metals. In mammalian cells MT genes are highly inducible by many heavy metals including Zn, Cd, Hg, and Cu. Aquatic systems are contaminated by different pollutants, including metals, as a result of man's activities. Bivalve molluscs are known to accumulate high concentrations of heavy metals in their tissue and are widely used as bioindicators for pollution in marine and freshwater environments, with MTs frequently used as a valuable marker of metal contamination. We here describe the MT isoform gene expression patterns of marine and freshwater molluscs and fish species after Cd or Zn contamination. Contamination was carried out at a river site polluted by a zinc ore extraction plant or in the laboratory at low, environmentally relevant metal concentrations. A comparison for each species based on the accumulated MT protein levels often shows discrepancies between gene expression and protein level. In addition, several differences observed in the pattern of MT gene expression between mollusc and mammalian species enable us to discuss and challenge a model for the induction of MT gene expression.

(Biochimie. vol. 88, n° 0300-9084, pp. 1787-1792, 01/11/2006)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

Carbon dioxide in European coastal waters

A.V. Borges, L.-S. Schiettecatte, G. Abril, B. Delille, Frédéric Gazeau

(Estuarine, Coastal and Shelf Science. vol. 70, n° 0272-7714, pp. 375-387, 01/11/2006)

ULiège, MARE, ULiège, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, MARE, ULiège, LOV, OOVM, UPMC, INSU - CNRS, CNRS, UPMC, INSU - CNRS, CNRS

Comparing proxies for the reconstruction of LGM sea-surface conditions in the northern North Atlantic

A. de Vernal, A. Rosell-Melé, M. Kucera, C. Hillaire-Marcel, F. Eynaud, M. Weinelt, T. Dokken, M. Kageyama

(Quaternary Science Reviews. vol. 25, n° 0277-3791, pp. 2820-2834, 01/11/2006)

GEOTOP, EPM, UdeM, UQAT, UQAR, UQAM, ICTA, UAB, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, CAU, BCCR, BIO / UiB, UiB, LSCE, UVSQ, INSU - CNRS, CNRS, DRF (CEA), CEA, CLIM, LSCE, UVSQ, INSU - CNRS, CNRS, DRF (CEA), CEA

Methane and carbon dioxide emissions from tropical reservoirs: Significance of downstream rivers

Frédéric Guérin, Gwenaël Abril, Sandrine Richard, Benoît Burban, Cécile Reynouard, Patrick Seyler, Robert Delmas

Methane (CH4) and carbon dioxide (CO2) concentrations and water-air fluxes were measured in three tropical reservoirs and their respective rivers downstream of the dams. From reservoirs, CH4 and CO2 flux were in the range of 3 +/- 2 and 254 +/- 392 mmol.m-2.d-1, respectively. Rivers downstream of dams were significantly enriched in CH4 and CO2 originating from reservoir hypolimnions. From rivers, CH4 and CO2 flux were in the range of 60 +/- 38 and 859 +/- 400 mmol.m-2.d-1, respectively. Despite their relatively small surfaces, rivers downstream of dams accounted for a significant fraction (9-33% for CH4 and 7-25% for CO2) of the emissions across the reservoir surfaces classically taken into account for reservoirs. A significant fraction of CH4 appeared to degas at the vicinity of the dam (turbines and spillways), although it could not be quantified.

(Geophysical Research Letters. vol. 33, n° 0094-8276, pp. 21407, 01/11/2006)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, LMTG, UT3, Comue de Toulouse, CNRS, LAERO, IRD, UT3, Comue de Toulouse, INSU - CNRS, CNRS, CNRM, INSU - CNRS, CNRS, Comue de Toulouse