Publications

Publications

Publications

Publications

Publications

Publications

Publications

Publications

Evolution morphologique et processus sédimentaires actuels du plateau continental interne sud-aquitain : étude comparée des zones de la Salie-Biscarosse (Sud des passes d'Arcachon) et la zone de la tête du canyon de Capbreton.

Alaïs Mazières

Ce travail présente une analyse de l'évolution morphologique et des processus sédimentaires actuels du plateau continental interne sud-aquitain, (sud-est du Golfe de Gascogne, France),secteur riche en données, mais sur lequel de nombreuses questions restent néanmoins en suspens. Il s'articule autour de deux zones ateliers complémentaires : la zone de « La Salie-Biscarrosse » sur le plateau continental interne sud-aquitain au sud des passes du Bassin d'Arcachon (entre 5 et 50 m de profondeur d’eau), et la tête du canyon de Capbreton et ses abords (entre 5 et 120 m de profondeur d’eau). Deux approches sont utilisées : (1) une approche descriptive et comparative (dans le temps), utilisant des données géo-acoustiques(sondeur multi faisceaux, sonar latéral et sondeur de sédiments), des prélèvements et (2) une approche mettant en oeuvre des modélisations numériques des interactions houles / courants /sédiments. Les résultats obtenus sur le plateau interne aquitain ont permis d'améliorer la connaissance de la morphologie, de la nature et de la géométrie interne des corps sédimentaires, d'étudier leur évolution au cours des 29 dernières années (entre 1984 et 2013)et de proposer des facteurs à l’origine de cette évolution. Le résultat majeur est la mise en évidence de « sorted bebforms » entretenus par la houle; dont la surprenante migration vers le nord-est est à associer à la récente découverte d'intenses épisodes de « poleward current » sur le plateau. Le suivi entre 1998 et 2013 de l’évolution morphologique de la tête du Canyon de Capbreton, située à seulement 250 m du littoral montre une évolution rapide qui fluctue cependant autour d'une position d'équilibre. Par ailleurs l’influence de la dérive littorale sur les transferts de sédiments du plateau vers le canyon a pu être démontrée. En-effet, les arguments morphologiques et sédimentaires, associés à la modélisation numérique, prouvent que la dérive littorale aquitaine alimente épisodiquement (conditions de houle forte) la tête de canyon en sables littoraux.

(23/10/2014)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

Effects of standard humic materials on relative bioavailibility of NDL-PCBs in juvenile swine

Matthieu Delannoy, Jessica Schwartz, Agnès Fournier, Guido Rychen, J. F. Narbonne, Cyril Feidt

(05/10/2014)

URAFPA, INRA, UL, LPTC, UB, CNRS, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

Origin and architecture of a Mass Transport Complex on the northwest slope of Little Bahama Bank (Bahamas): Relations between off-bank transport, bottom current sedimentation and submarine landslides

Elsa Tournadour, Thierry Mulder, J. Borgomano, Vincent Hanquiez, Emmanuelle Ducassou, Herve Gillet

The analysis of the sedimentary dynamics of the carbonate slope of the northwest part of Little Bahama Bank (LBB, Bahamas) reveals a complex interaction between slope destabilisations, off-bank sediment export and longitudinal transport, the latter being driven by the Antilles and the Florida currents, at the northern end of the Florida Strait. Their combined action since the middle Miocene resulted in an extensional growth slope, previously called ‘LBB Drift’ (Mullins et al., 1980). Deposition within this extensional growth slope is dominated by either platform-derived downslope sedimentation or bottom current sedimentation. The latter induces the formation of a plastered drift, showing both upslope and downslope migrations, which do not correspond to the ‘LBB Drift’ as described by Mullins et al. (1980). Interestingly, a large submarine landslide affects the upper part of this plastered drift, and displays a complex and striking geomorphology on the seafloor. A new high-quality multibeam echosounder and seismic dataset allowed a detailed characterisation of the architecture of this Mass Transport Complex (MTC). A 44 km-long circular incision at 275 m and 460 m water depths, with a steep external edge (from 40 to 70 m high), forms the only present day evidence of this ancient MTC. It comprises confined Mass Transport Deposits (MTDs), which are delimited by frontal and lateral edges that developed inside the plastered drift. The top of this plastered drift is marked by a major erosional surface, most likely induced by an increase in oceanic current circulation. Channelised geometries, laterally associated with overspill deposits, developed within the depression induced by the MTC, and are an additional evidence of bottom current activity in this area. In addition, recent pockmarks are visible on the seafloor in front of the circular scarp of the MTC and probably relate to fluid escape, originating from the underlying MTDs' compressional area.

(Sedimentary Geology. vol. 317, n° 0037-0738, pp. 9-26, 01/10/2014)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

21,000 Years of Ethiopian African monsoon variability recorded in sediments of the western Nile deep-sea fan

Marie Revel, Christophe Colin, Stefano Bernasconi, Nathalie Combourieu-Nebout, Emmanuelle Ducassou, Francis E. Grousset, Yann Rolland, Sebastien Migeon, Delphine Bosch, Pierre Brunet, Yulong Zhao, Jean Mascle

(Regional Environmental Change. vol. 14, n° 1436-3798, pp. 1685-1696, 01/10/2014)

GEOAZUR 6526, IRD, UPMC, UNS, INSU - CNRS, UniCA, CNRS, GEOPS, UP11, CNRS, ETH Zürich, LSCE, UVSQ, INSU - CNRS, CNRS, DRF (CEA), CEA, PALEOCEAN, LSCE, UVSQ, INSU - CNRS, CNRS, DRF (CEA), CEA, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, GEOAZUR 7329, INSU - CNRS, UniCA, CNRS, IRD [Occitanie], IRD, UniCA, UAG, INSU - CNRS, UM, CNRS, CTAD, ENS-PSL, PSL, EHESS, UPN, CNRS, DREAM, Inria, IRISA-D7, IRISA, UR, INSA Rennes, UBS, ENS Rennes, Inria, CNRS, OOVM, UPMC, INSU - CNRS, CNRS

Analysis of airborne pesticides from different chemical classes adsorbed on Radiello® Tenax® passive tubes by thermal-desorption-GC/MS

Caroline Raeppel, Marie Fabritius, Marie Nief, Brice M. R. Appenzeller, Olivier Briand, Ludovic Tuduri, Maurice Millet

An analytical methodology using automatic thermal desorption (ATD) and GC/MS was developed for the determination of 28 pesticides of different chemical classes (dichlobenil, carbofuran, trifluralin, clopyralid, carbaryl, flazasulfuron, mecoprop-P, dicamba, 2,4-MCPA, dichlorprop, 2,4-D, triclopyr, cyprodinil, bromoxynil, fluroxypyr, oxadiazon, myclobutanil, buprofezin, picloram, trinexapac-p-ethyl, ioxynil, diflufenican, tebuconazole, bifenthrin, isoxaben, alphacypermethrin, fenoxaprop and tau-fluvalinate) commonly used in nonagricultural areas in atmospheric samples. This methodology was developed to evaluate the indoor and outdoor atmospheric contamination by nonagricultural pesticides. Pesticides were sampled passive sampling tubes containing Tenax® adsorbent. Since most of these pesticides are polar (clopyralid, mecoprop-P, dicamba, 2,4-MCPA, dichlorprop, 2,4-D, triclopyr, bromoxynil, fluroxypyr, picloram, trinexapac-p-ethyl and ioxynil), a derivatisation step is required. For this purpose, a silylation step using N-(t-butyldimethylsilyl)-N-methyltrifluoroacetamide (MtBSTFA) was added before thermal desorption. This agent was chosen since it delivers very specific ions on electronic impact (m/z = M-57). This method was established with special consideration for optimal thermal desorption conditions (desorption temperature, desorb flow and duration; trap heating duration and flow; outlet split), linear ranges, limits of quantification and detection which varied from 0.005 to 10 ng and from 0.001 to 2.5 ng, respectively, for an uncertainty varied from 8 to 30 %. The method was applied in situ to the analysis of passive tubes exposed during herbicide application to an industrial site in east of France.

(Environmental Science and Pollution Research. vol. 22, n° 0944-1344, pp. 2726-2734, 11/09/2014)

ICPEES, UNISTRA, INC-CNRS, CNRS, MNGE, UNISTRA, Université de Haute-Alsace (UHA), INSERM, INC-CNRS, CNRS, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

Communities: Are they groups of hidden interactions?

Richard Michalet, Shu‐yan Chen, Li‐zhe An, Xiang‐tai Wang, Yu‐xin Wang, Peng Guo, Chen‐chen Ding, Sa Xiao

Questions Ecologists are increasingly interested in community-level consequences of biotic interactions. However, community-level studies have not considered that biotic interactions might have contrasting directions within communities, and indirect interactions are rarely quantified although they may influence community-level outcomes. We tested the hypotheses that in species-rich plant communities from intermediate severe environmental conditions: (1) direct facilitation by dominant functional groups is balanced by negative indirect interactions among beneficiary species with no net effect at the community level on diversity and biomass, and (2) both direct and indirect interactions contribute to community composition. Location A species-rich subalpine community of the eastern Tibet Plateau (China). Methods We removed dominant shrubs and graminoids and quantified, at the community and species levels, their direct and indirect effects on 43 forb species. We used multivariate analyses to assess the contribution of direct and indirect effects on community composition. Results There were no community-level effects of either dominant life form on forb diversity and biomass. There were multiple species-level interactions that we grouped into six types based on the direction and intensity of indirect effects. We found significant relationships between species-level interactions and community composition. Conclusions Our study highlights that communities are sets of hidden interactions that contribute to community composition, although no interaction might be detected at the community level because hidden interactions balance each other. Future studies should assess the ecological and functional drivers of these hidden interactions.

(Journal of Vegetation Science. vol. 26, n° 1100-9233, pp. 207-218, 01/09/2014)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

How does the resuspension of the biofilm alter the functioning of the benthos–pelagos coupled food web of a bare mudflat in Marennes-Oléron Bay (NE Atlantic)?

Blanche Saint-Béat, Christine Dupuy, Hélène Agogué, Alexandre Carpentier, Julien Chalumeau, Serena Como, Valérie David, Margot de Crignis, Jean-Claude Duchêne, Camille Fontaine, Éric Feunteun, Katell Guizien, Hans Hartmann, Johann Lavaud, Sébastien Lefebvre, Christel Lefrançois, Clarisse Mallet, Hélène Montanié, Jean-Luc Mouget, Francis Orvain, Pascaline Ory, Pierre-Yves Pascal, Gilles Radenac, Pierre Richard, Nathalie Niquil

Intertidal mudflats are ecosystems submitted to natural hydrodynamical forcings during each tide. When the off-shore water flows at high tide, a proportion of the biofilm produced at low tide can be resuspended in the water column and interact with the pelagic food web. As a consequence, the resuspension creates a link between the benthos and the pelagos, modifying their properties and the stability of the meta-ecosystem they form together. The aim of this study is to describe the consequences of the microbial biofilm resuspension on the pelagic food web, and to investigate the question of the stability of the benthos–pelagos coupling resulting from the biofilm resuspension. Two food webs were considered, corresponding to different hydrodynamical conditions in sum-mer condition: one allowing the biofilm massive resuspension, and one without resuspension, but with particle sedimentation. The Monte-Carlo Markov Chain Linear Modelling was used to estimate the unknown flows of the food web. The comparison of the Ecological Network Analysis indices for the two food webs allowed defining their respective differences of structure and functioning. The results showed that the massive resuspension of the microbial biofilm stimulates pelagic primary production and microbial food web via a higher bacterivory. The higher activity of the whole system coupled with both a drop in the specialisation of the trophic pathways and a low cycling activity demonstrated that when massive resuspension occurs, the system is disturbed. In con-trast, when sedimentation occurs, the food webs show functioning features pointing out to a higher stability of the whole system.

(Journal of Sea Research (JSR). vol. 92, n° 1385-1101, pp. 144-157, 01/09/2014)

LIENSs, INSU - CNRS, ULR, CNRS, CRESCO, MNHN, IFREMER, BOREA, UNICAEN, NU, MNHN, IRD, SU, CNRS, UA, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, CRESCO, MNHN, IFREMER, LECOB, OOB, UPMC, CNRS, UPMC, CNRS, CNRS, LOG, INSU - CNRS, ULCO, CNRS, IRD [Ile-de-France], LMGE, UCA [2017-2020], CNRS, MMS, UM, UN UFR ST, UN, UFR SPB, UN, BioMEA, UNICAEN, NU, CNRS

A new sliced inverse regression method for multivariate response

Raphaël Coudret, Stéphane Girard, Jerome Saracco

A semiparametric regression model of a q-dimensional multivariate response y on a p-dimensional covariate x is considered. A new approach is proposed based on sliced inverse regression (SIR) for estimating the effective dimension reduction (EDR) space without requiring a prespecified parametric model. The convergence at rate square root of n of the estimated EDR space is shown. The choice of the dimension of the EDR space is discussed. Moreover, a way to cluster components of y related to the same EDR space is provided. Thus, the proposed multivariate SIR method can be used properly on each cluster instead of blindly applying it on all components of y. The numerical performances of multivariate SIR are illustrated on a simulation study. Applications to a remote sensing dataset and to the Minneapolis elementary schools data are also provided. Although the proposed methodology relies on SIR, it opens the door for new regression approaches with a multivariate response.

(Computational Statistics and Data Analysis. vol. 77, n° 0167-9473, pp. 285-299, 01/09/2014)

IMB, UB, Bordeaux INP, CNRS, CQFD, IMB, UB, Bordeaux INP, CNRS, Inria, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, MISTIS, Inria, LJK, UPMF, UJF, Grenoble INP, CNRS, Grenoble INP, ENSC

Physiological responses of Manila clams Venerupis (=Ruditapes) philippinarum with varying parasite Perkinsus olseni burden to toxic algal Alexandrium ostenfeldii exposure.

Malwenn Lassudrie, Philippe Soudant, Gaëlle Richard, Nicolas Henry, Walid Medhioub, Patricia Mirella da Silva, Anne Donval, Mélanie Bunel, Nelly Le Goïc, Christophe Lambert, Xavier de Montaudouin, Caroline Fabioux, Helene Hegaret

Manila clam stock from Arcachon Bay, France, is declining, as is commercial harvest. To understand the role of environmental biotic interactions in this decrease, effects of a toxic dinoflagellate, Alexandrium ostenfeldii, which blooms regularly in Arcachon bay, and the interaction with perkinsosis on clam physiology were investigated. Manila clams from Arcachon Bay, with variable natural levels of perkinsosis, were exposed for seven days to a mix of the nutritious microalga T-Iso and the toxic dinoflagellate A. ostenfeldii, a producer of spirolides, followed by seven days of depuration fed only T-Iso. Following sacrifice and quantification of protozoan parasite Perkinsus olseni burden, clams were divided into two groups according to intensity of the infection ("Light-Moderate" and "Moderate-Heavy"). Hemocyte and plasma responses, digestive enzyme activities, antioxidant enzyme activities in gills, and histopathological responses were analyzed. Reactive oxygen species (ROS) production in hemocytes and catalase (CAT) activity in gills increased with P. olseni intensity of infection in control clams fed T-Iso, but did not vary among A. ostenfeldii-exposed clams. Exposure to A. ostenfeldii caused tissue alterations associated with an inflammatory response and modifications in hemocyte morphology. In the gills, superoxide dismutase (SOD) activity decreased, and an increase in brown cell occurrence was seen, suggesting oxidative stress. Observations of hemocytes and brown cells in tissues during exposure and depuration suggest involvement of both cell types in detoxication processes. Results suggest that exposure to A. ostenfeldii disrupted the pro-/anti-oxidant response of clams to heavy P. olseni intensity. In addition, depressed mitochondrial membrane potential (MMP) in hemocytes of clams exposed to A. ostenfeldii suggests that mitochondrial functions are regulated to maintain homeostasis of digestive enzyme activity and condition index.

(Aquatic Toxicology. vol. 154, n° 0166-445X, pp. 27-38, 01/09/2014)

LEMAR, IRD, IFREMER, UBO EPE, CNRS, IFREMER, INSTM, UFPB, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

A framework for investigating general patterns of benthic β-diversity along estuaries

Francisco Barros, Hugues Blanchet, Kamille Hammerstrom, Pierre-Guy Sauriau, John Oliver

The description of major patterns in beta (β) diversity is important in order to understand changes in community composition and/or richness at different spatial and temporal scales, and can interrogate processes driving species distribution and community dynamics. Human impacts have pushed many estuarine systems far from their historical baseline of rich, diverse, and productive ecosystems. Despite the ecological and social importance of estuaries, there has not yet been an attempt to investigate patterns of β-diversity and its partitioning along estuarine systems of different continents. We aimed to evaluate if benthic assemblages would show higher turnover than nestedness in tropical than in temperate systems, if well-known impacted estuaries would show greater nestedness than less polluted systems, and to propose a conceptual framework for studying benthic macrofauna beta diversity along estuaries. We analyzed subtidal benthic macrofaunal data from estuaries in Brazil, USA and France. We estimated alpha (α), beta (β) and gamma (γ) diversity for each sampling time in each system, investigated patterns of β -diversity as multivariate dispersion and the partitioning (nestedness and replacement) of β-diversity along each estuary. There was a decrease in the α-diversity along marine to freshwater conditions at most of the estuaries and sampling dates. Beta diversity as multivariate dispersion showed high variability. Most of the estuaries showed a greater proportion of the β-diversity driven by replacement than nestedness. We suggest a conceptual framework for estuaries where relatively pristine estuaries would have their β-diversity mostly driven by replacement while impacted estuaries subjected to several anthropogenic stressors would show total nestedness or total replacement, depending on the stress.

(Estuarine, Coastal and Shelf Science. vol. 149, n° 0272-7714, pp. 223-231, 05/08/2014)

SJSU, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, LIENSs, INSU - CNRS, ULR, CNRS