Publications

Publications

Publications

Publications

Publications

Publications

Publications

Publications

Lab-scale experimental strategy for determining micropollutant partition coefficient and biodegradation constants in activated sludge

Maxime Pomies, J.M. Choubert, Christelle Wisniewski, Cecile Miege, H. Budzinski, Marina Coquery

The nitrifying/denitrifying activated sludge process removes several micropollutants from wastewater by sorption onto sludge and/or biodegradation. The objective of this paper is to propose and evaluate a lab-scale experimental strategy for the determination of partition coefficient and biodegradation constant for micropollutant with an objective of modelling their removal. Four pharmaceutical compounds (ibuprofen, atenolol, diclofenac and fluoxetine) covering a wide hydrophobicity range (log Kow from 0.16 to 4.51) were chosen. Dissolved and particulate concentrations were monitored for 4 days, inside two reactors working under aerobic and anoxic conditions, and under different substrate feed conditions (biodegradable carbon and nitrogen). We determined the mechanisms responsible for the removal of the target compounds: (i) ibuprofen was biodegraded, mainly under aerobic conditions by cometabolism with biodegradable carbon, whereas anoxic conditions suppressed biodegradation; (ii) atenolol was biodegraded under both aerobic and anoxic conditions (with a higher biodegradation rate under aerobic conditions), and cometabolism with biodegradable carbon was the main mechanism; (iii) diclofenac and fluoxetine were removed by sorption only. Finally, the abilities of our strategy were evaluated by testing the suitability of the parameters for simulating effluent concentrations and removal efficiency at a full-scale plant.

(Environmental Science and Pollution Research. vol. 22, n° 0944-1344, pp. 4383-4395, 23/04/2026)

UR MALY, IRSTEA, UMR Qualisud, Cirad, UM1, UM2, Montpellier SupAgro, AU, UR, UM, Montpellier SupAgro, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

Pression de sélection des barrages aquatiques sur la migration des civelles : approche moléculaire et comportementale

T. Podgorniak, Françoise Daverat, F. Pierron, Eduardo Henrique de Oliveira

L’anguille européenne est une espèce amphihaline à migration catadrome facultative et à reproduction panmictique dans la mer de Sargasses. La dynamique de sa population est en fort déclin depuis les années 80. Parmi les facteurs qui ont pu contribuer à la disparition de l’espèce, on peut citer la pollution, la surpêche et la fragmentation de l’habitat. Ce dernier est intimement lié à la construction des barrages aquatiques. En effet, les rivières aménagées créent un obstacle au déplacement des anguilles dans les deux sens, c’est-à-dire lors de leur migration de croissance (en amont) ou de reproduction (en aval). Beaucoup d’efforts ont été faits afin d’augmenter la transparence de ces ouvrages. Par exemple, la migration en amont des jeunes stades d’anguilles est facilitée par la construction des passes à civelles, dont le design est adapté à leur taille et comportement. D’une manière générale, l’évaluation de l’impact des barrages, mais aussi de l’efficacité des passes à civelles est quantitative, où seule la proportion des poissons présents dans la parte amont du barrage/passe est comparée au nombre des poissons présents au pied du barrage ou s’engageant dans la passe. Malheureusement, la variabilité entre les individus pour les traits comme la capacité de nage ou d’escalade, la motivation, l’activité ou le comportement exploratoire est rarement prise en compte dans ce contexte. Cependant, certains traits pourraient faciliter le succès de passage par les obstacles, ce qui aboutirait à une sélection Afin d’évaluer si les barrages exercent une pression de sélection sur les civelles migrantes, une étude qualitative à été réalisée sur des groupes des civelles présentes d’une part et d’autre des obstacles. Tout d’abord, une approche par puce ADN a été adoptée pour identifier sans à priori les traits différant entre les groupes amont et aval. Ensuite, les tests expérimentaux ont été réalisés afin d’associer le phénotype moléculaire (expression des gènes) au phénotype organismique (comportement). Parmi les trois tissus étudiés ; le muscle, le foie et le cerveau, seul ce dernier a montré des différences significatives entre les groupes amont et aval des obstacles. Les gènes surexprimés des les parties amont des barrages sont impliqués dans la régulation de la plasticité synaptique et du développement neuronal, qui à son tour sont sollicités dans les processus de cognition, apprentissage et mémorisation. Le comportement d’escalade des parois verticales, souvent effectué en dehors de l’eau, est une condition à laquelle les civelles sont soumises pour la première fois de leur vie, ce qui peut suggérer que le processus d’apprentissage s’est mis en place à ce moment précis. Un tri comportemental effectué dans les conditions expérimentales confirme en partie l’association entre l’expression des gènes de plasticité synaptique et le comportement d’escalade individuel.

(pp. 1, 23/04/2026)

UR EABX, IRSTEA, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, EDF [E.D.F.]

Evaluation de la sensibilité des jeunes stades d'esturgeons européens aux polluants : chapitre V

Nicolas Delage, E. Eveilleau, Laure Landi, Eric Rochard, Jérôme Cachot, Philippe Jatteau

Les objectifs de cette étude sont (i) d'évaluer la possibilité de créer artificiellement un sédiment dopé agissant de la même manière qu'un sédiment naturel chez l'esturgeon européen (ii) d'évaluer la sensibilité des jeunes stades d'esturgeon européen à différentes concentrations d'un mélange représentatif des polluants organiques et métalliques rencontrés dans l'environnement (iii) et enfin d'évaluer l'effet combiné de l'exposition aux polluants et à une augmentation de la température.

(pp. 59-70, 23/04/2026)

UR EABX, IRSTEA, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

Is the toxicity of pesticide mixtures on river biofilm accounted for solely by the major compounds identified?

Sandra Kim Tiam, Soizic Morin, B. Bonet, H. Guasch, Agnès Feurtet-Mazel, Mélissa Eon, Patrice Gonzalez, Nicolas Mazzella

The study aimed to characterize the effects of long-term and low-dose exposure to pesticides on natural biofilm communities and to evaluate if the effects due to PE exposure could be explained solely by the major compounds identified in the extracts.

(Environmental Science and Pollution Research. vol. 22, n° 0944-1344, pp. 4009-4024, 23/04/2026)

UR EABX, IRSTEA, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, UdG

Dinoflagellate cyst population evolution throughout past interglacials: Key features along the Iberian margin and insights from the new IODP Site U1385 (Exp 339)

Frédérique Eynaud, Laurent Londeix, Aurélie Pénaud, Maria-Fernanda Sanchez-Goni, Dulce Oliveira, Stéphanie Desprat, Jean-Louis Turon

IODP 339 Site U1385 ("Shackleton site", e.g. Hodell et al., 2013a), from the SW Iberian margin, offers the opportunity to study marine microfossil population dynamics by comparing several past interglacials and to test natural shifts of species that occurred across these warm periods, in a subtropical context. Here, more specifically, we present results obtained for the dinoflagellate cyst (dinocyst) population integrated at a regional scale thanks to the addition of data from proximal sites from southern Iberian margin. When possible, observations made using the dinocyst bio-indicator are compared to additional proxies from the same records in order to test the synchronicity of the marine biota response. Pollen data available for some of the compiled marine sequences also offer the opportunity to directly compare marine biota with terrestrial ecosystem responses. This spatio-temporal compilation reveals that, over the last 800 ka, surface waters around Iberia were tightly coupled to (rapid) climate changes and were characterised by coherent dinocyst assemblage patterns, highlighting a permanent connection between Atlantic and Mediterranean waters as evidenced through a continuous exchange of dinocyst populations. Some index species well illustrate the evolution of the regional hydrographic context along time, as for instance Spiniferites and Impagidinium species, together with Lingulodinium machaerophorum, Bitectatodinium tepikiense and heterotrophic brown cysts. They constitute key bio-indicators in context of natural environmental shifts at long and short timescales.

(Global and Planetary Change, n° 0921-8181, pp. in press, 23/04/2026)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, LDO, INSU - CNRS, UBO EPE, CNRS, IPMA, CIMA, UAlg

Complex communities exposed to multiple pollutants: using passive sampler extracts in periphyton ecotoxicology

Soizic Morin, Sandra Kim Tiam, Stéphane Pesce, Aurélie Moreira, Mélissa Eon, C. Gardia Parege, H. Budzinski, Nicolas Mazzella

In rivers, risk assessment requires taking into account both the complexity of contaminations (multiple substances at low concentrations), and the increasing demand for ecologically realistic biological endpoints used in toxicity testing. These issues can be tackled by coupling toxicity assessment using complex communities, such as periphyton (composed of microalgae, bacteria, fungi, protozoa, etc.), and complex contaminants like passive samplers extracts (PSE). Here we propose to review some recent progresses in ecotoxicology allowed by the joint use of PSE from POCIS (Polar Organic Chemical Integrative Samplers) and river periphyton. More specifically, we will present diverse experimental approaches, aiming: at characterizing the “toxic potential” of waters and applying the pollution community induced tolerance –PICT– approach to pesticide mixtures, at identifying the compounds responsible for toxicity in the mixture (effect-directed analyses –EDA), and at increasing the environmental realism in microcosm experiments by performing chronic low dose exposure to mixtures from PSE. We were able to detect PICT in periphyton collected in rivers showing a gradient of increasing pesticide concentrations or at sites with different contamination profiles using toxicity tests with PSE from the field. From a pesticide mixture that proved to be toxic, we performed successive fractionation steps to identify, through an EDA approach, the substance(s) responsible for toxicity. In the mixture we used, however, no individual fraction was found to explain the impacts of the cocktails, whereas combinations of fractions did. This highlights the need to consider the “mixture issue” in environmental risk assessment. One way to improve mixture toxicity assessment is to implement chronic exposure experiments with PSE. We successfully performed artificial channel experiments using of PSE as a complex contaminant at low doses. The environmentally relevant concentrations tested drove community changes, in their structure (biomass, composition) as well as in their functions (enzymatic activities). Altogether, these encouraging results open wide perspectives for a more realistic risk assessment, from both biological and chemical points of view.

(pp. 2, 23/04/2026)

UR EABX, IRSTEA, UR MALY, IRSTEA, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

Feeding Habitats, Connectivity and Origin of Organic MatterSupporting Fish Populations in an Estuary with a ReducedIntertidal Area Assessed by Stable Isotope Analysis

J. Selleslagh, H. Blanchet, G. Bachelet, Jérémy Lobry

Stable isotopes (delta13C and delta15N) were used to analyse the food web downstream of the largest estuary on the French coast: the Gironde. The different sources of organic matter supporting the most abundant and commercially important fish species were determined, as well as habitat connectivity for fish. Stable isotope analysis was performed in different producers (marine, freshwater and local sources), primary consumers (zooplankton and macrozoobenthos) and nine fish species (Alosa alosa, Engraulis encrasicolus, Sprattus sprattus, Liza ramada, Pomatoschistus minutus, Platichthys flesus, Solea solea, Dicentrarchus punctatus and Argyrosomus regius) in three habitats of the downstream area of the estuary in June–July 2012. All sources and invertebrates had significantly different isotopic signatures in different habitats. Only sole, S. solea, presented distinct dual isotopic signatures, indicating a higher feeding location fidelity, no other fish species showed significant differences in isotopic signatures. This overlap was interpreted as evidence that fish had not been feeding exclusively in the habitat where they were collected, instead ingesting food with different isotopic signatures, reflecting high habitat connectivity for these fish. As the base of the fish food web significantly differed among habitats, the present study indicated the suitability of stable isotopes in tracing fish movements and their fidelity/connectivity for habitats separated by less than 10 km, particularly estuarine habitats without salinity differences but located on opposite banks. The SIAR mixing model estimations of organic matter contribution to fish diets in the Gironde estuary were quite similar for the fish species investigated. The major organic source was marine-derived POM, with contributions >75 % for each species. Freshwater and local POM (generally indicated as the sources structuring estuarine food webs) contributed little to the overall fish food webs in the Gironde estuary. Only flounder, P. flesus, and shad, A. alosa, migratory amphihaline species, utilised freshwater POM in greater proportion than marine. The observed low freshwater POM-high marine POM contribution to the fish food web seems to be explained by the reduced intertidal surface of the system. This characterization of the trophic base and habitat connectivity for the most important Gironde estuary fish provides a novel insight for future management of the estuary, especially in the current context of global change.

(Estuaries and Coasts. vol. 38, n° 1559-2723, pp. 1431-1447, 23/04/2026)

UR EABX, IRSTEA, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

Levantine intermediate water hydrodynamic and bottom water ventilation in the northern Tyrrhenian Sea over the past 56,000 years: new insights from benthic foraminifers and ostracods

Charlie Morelle C. M. Angue Minto'O, Maria-Angela Bassetti, C. Morigi, E. Ducassou, Samuel S. Toucanne, Gwenael Jouet, T. Mulder

Foraminifera and ostracods have been quantitatively studied in core MD01-2472, from the upper continental slope (at water depth of 501 m), to evaluate their relationship with bottom water condition variability and decipher the control of the Levantine Intermediate Water (LIW) current on benthic faunas. The occurrence of reworked ostracod species (originating from the continental shelf) and, the presence of shallow water Elphidium/Ammonia benthic foraminifera are used to estimate the degree of along-slope transport at the core site. This has revealed two intervals of along-slope transport also associated with coarse-grained contourite deposits, deposited during the YD and HS2 episodes. Planktonic-benthic foraminiferal and ostracod assemblages reflect climate oscillations. Peaks of the polar planktonic Neogloboquadrina pachyderma (left-coiling S) may be used to identify Heinrich Events. Interstadials are marked by abundant ostracod species such as Paracypris sp., Argilloecia acuminata, and Cytheropteron alatum and the presence of benthic foraminifera like Bulimina marginata, Bulimina costata and Gyroidina altiformis. The B–A and Holocene are characterized by abundant warm water species of planktonic foraminifera and by the ostracod species Polycope sp. We hypothesize that there is relationship between LIW intensification during cold rapid climate events and benthic fauna assemblage variations due to changes in: 1) bottom water ventilation; and 2) the export of nutrients and/or sediment particles by bottom currents.

(Quaternary International, n° 1040-6182, pp. 395-313, 23/04/2026)

CEFREM, UPVD, INSU - CNRS, CNRS, UniPi, GEUS, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, GM, IFREMER

Trophic networks: How do theories link ecosystem structure and functioning to stability properties? A review

B. Saint-Béat, D. Baird, H. Asmus, R. Asmus, C. Bacher, S.R. Pacella, G.A. Johnson, V. David, A.F. Vézina, N. Niquil

In the context of present global changes, interest in understanding how systems respond to anthropogenic environmental pressures and stress has increased. Indices that characterize ecosystem state are helpful tools for the interpretation of ecosystem responses. The central question is how to link these responses to ecosystem structure and functioning and to quantify ecosystem persistence, resistance or resilience. Quantification and characterization of trophic networks by ecological network analysis (ENA) indices is proceeding rapidly, especially in the field of coastal ecology. In this contribution, we review several theories that relate ecosystem structure and function to stability. The structure and functioning of ecosystems change during the maturation of ecosystems. In the first section, the maturation of ecosystems is described using thermodynamics. In the second and third parts of this paper, we define some concepts for analysing structure and functioning of food webs and discuss their relation to stability. In the last section, we describe three ENA indices and their link to stability. We demonstrate that ENA provides powerful tools for describing local stability, combining quantitative and qualitative concepts. However, it remains incomplete for describing real conservation cases that combine local and global stability. © 2015 Elsevier Ltd. All rights reserved.

(Ecological Indicators. vol. 52, n° 1470-160X, pp. 458--471, 23/04/2026)

LIENSs, INSU - CNRS, ULR, CNRS, JSC, AWI, DYNECO, IFREMER, AWI, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, IOB, BOREA, UNICAEN, NU, MNHN, IRD, SU, CNRS, UA, CNRS, UNICAEN, NU, NU

Peut-on améliorer l’élimination des micropolluants des eaux usées en optimisant le procédé à boues activées ?

J.M. Choubert, Maxime Pomies, H. Budzinski, M. Esperanza, K. Le Ménach, N. Noyon, C. Crétollier, L. Dherret, Cecile Miege, Marina Coquery

Cette étude visait à améliorer l'élimination des micropolluants en modifiant les conditions de fonctionnement du procédé boues activées aération prolongée. Cette question a nécessité de mesurer les coefficients de sorption et les constantes de biodégradation (étude pilote), et de décrire la variabilité des concentrations dans les eaux usées brutes et les boues d'une installation vraie grandeur. 53 micropolluants ont été étudiés (11 métaux et 42 substances organiques). Au total, 8 campagnes d’échantillonnage de quelques jours ont été réalisées sur une durée d’un an, pour différentes conditions de fonctionnement de l'installation (concentration en boue, durée de présence d'oxygène, température). Les concentrations dans les eaux usées brutes ont varié de façon importante pour les substances organiques (50 à 100%), mais moindre pour les métaux (30%). Au cours d’une période de 24 heures, des concentrations deux fois plus élevées ont été mesurées dans la journée (6 h à 24 h), par comparaison aux concentrations mesurées la nuit pour plusieurs substances (ex. zinc, plomb, nonylphénol, propranolol, diclofénac). Nous avons démontré que la biodégradation explique l’élimination d’une dizaine de substances (ex. paracétamol, acébutolol, aténolol, ibuprofène, nonyl- et octyl-phénol). La sorption seule explique le transfert dans les boues des HAP lourds et des métaux. La sorption et biodégradation expliquent conjointement l’élimination d’une dizaine d’autres substances (ex. propranolol et quelques HAP). En complément, nous avons démontré que la biodégradation se déroule principalement en condition aérobie, surtout en présence simultanée de DCO et d’azote ammoniacal dans le bioréacteur, et avec une vitesse moindre en présence d’azote seul et très faible en phase endogène. Nous avons mesuré une faible dégradation des micropolluants une fois adsorbés sur les boues (

(TSM. Techniques Sciences Méthodes – Génie urbain, génie rural, n° 0299-7258, pp. 32-50, 23/04/2026)

UR MALY, IRSTEA, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS