Publications

Publications

Publications

Publications

Publications

Publications

Publications

Publications

Growth and behaviour of blue mussels, a re-emerging polar resident, follow a strong annual rhythm shaped by the extreme high Arctic light regime

Damien Tran, Hector Andrade, Guillaume Durier, Pierre Ciret, Peter Leopold, Mohamedou Sow, Carl Ballantine, Lionel Camus, Jørgen Berge, Mickael Perrigault

Polar regions are currently warming at a rate above the global average. One issue of concern is the consequences on biodiversity in relation to the Northward latitudinal shift in distribution of temperate species. In the present study, lasting almost two years, we examined two phenological traits, i.e. the shell growth and behavioural rhythm of a recently re-established species in the high Arctic, the blue mussel Mytilus sp. We compared this with a native species, the Islandic scallop Chlamys islandica. We show marked differences in the examined traits between the two species. In Mytilus sp., a clear annual pattern of shell growth strongly correlated to the valve behaviour rhythmicity, whereas C. islandica exhibited a shell growth pattern with a total absence of annual rhythmicity of behaviour. The shell growth was highly correlated to the photoperiod for the mussels but weaker for the scallops. The water temperature cycle was a very weak parameter to anticipate the phenology traits of both species. This study shows that the new resident in

(Royal Society Open Science. vol. 7, n° 2054-5703, pp. 200889, 01/10/2020)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

Comparison of imidacloprid, propiconazole, and nanopropiconazole effects on the development, behavior, and gene expression biomarkers of the Pacific oyster (Magallana gigas)

Eliška Kuchovská, Bénédicte Morin, Rocío López-Cabeza, Mathilde Barré, Corentin Gouffier, Lucie Bláhová, Jérôme Cachot, Luděk Bláha, Patrice Gonzalez

(Science of the Total Environment, n° 0048-9697, pp. 142921, 01/10/2020)

UB, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, CNRS

High‐Energy Surf Zone Currents and Headland Rips at a Geologically Constrained Mesotidal Beach

Arthur Mouragues, Philippe Bonneton, Bruno Castelle, Vincent Marieu, R Jak Mccarroll, Isaac Rodriguez‐padilla, Tim Scott, Damien Sous

We analyze Eulerian and Lagrangian measurements of wave-induced circulation collected during a 3-week field experiment at a high-energy mesotidal barred beach with the presence of a 500-m headland and a submerged reef. Small changes in wave and tide conditions were found to largely impact circulation patterns. Three main regimes were identified depending on offshore wave obliquity: (1) Under shore-normal configuration, the flow was dominated by cross-shore motions, except for moderate waves at low tide, with the presence of a quasi-steady circulation cell on the reef. (2) Under shadowed configuration, an onshore-directed current flowing away from the headland and a weak oscillating eddy were present outside and inside the shadow region, respectively. (3) Under deflection configuration, a deflection rip flowing against the headland and extending well beyond the surf zone was present, with activity maximized around low tide for moderate waves. Under 4-m oblique waves, the deflection rip was active regardless of the tide with mean depth-averaged velocities up to 0.7 m/s 800-m offshore in 12-m depth, with energetic low-frequency fluctuations. Our results emphasize the ability of deflection rips to transport materials far offshore, suggesting that such rips can transport sediment beyond the depth of closure. This study indicates that a wide variety of wave-driven circulation patterns can occur and sometimes coexist on beaches with prominent geological settings. Changes in the dominant driving mechanism can occur as a result of small changes in wave and tide conditions, resulting in more spatially and temporally variable circulation than along open sandy beaches. Plain Language Summary Most field experiments about wave-induced circulation patterns have been conducted along open sandy beaches, while experiments in geologically constrained environments are scarce. We performed intensive field measurements at a high-energy beach with the presence of a 500-m headland and a submerged natural reef. Three main circulation patterns were identified depending on the offshore wave obliquity. For shore-normal waves, cross-shore motions dominated the nearshore region, while oblique wave configurations resulted in more complex horizontal circulation. In particular, under intense headland-directed longshore current, the flow was deflected seaward against the headland. This deflection resulted in an intense seaward flowing jet (deflection rip) extending well beyond the surf zone edge, particularly during storm conditions. Such findings highlight the ability of these deflection rips to dominate water and sediment exchanges between the nearshore and the inner shelf region. Our study further outlines the more spatially and temporally variable circulation patterns occurring along geologically constrained beaches compared to open sandy beaches, ranging from small recirculating cells across the reef to a large deflection rip extending hundreds of meters beyond the surf zone.

(Journal of Geophysical Research. Oceans. vol. 125, n° 2169-9275, 01/10/2020)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, SIAME, UPPA

Mobilisation of data to stakeholder communities. Bridging the research-practice gap using a commercial shellfish species model

Kate E. Mahony, Sharon A. Lynch, Sian Egerton, Sara Cabral, Xavier de Montaudouin, Alice Fitch, Luisa Magalhaes, Melanie Rocroy, Sarah C. Culloty

Knowledge mobilisation is required to “bridge the gap” between research, policy and practice. This activity is dependent on the amount, richness and quality of the data published. To understand the impact of a changing climate on commercial species, stakeholder communities require better knowledge of their past and current situations. The common cockle (Cerastoderma edule) is an excellent model species for this type of analysis, as it is well-studied due to its cultural, commercial and ecological significance in west Europe. Recently, C. edule harvests have decreased, coinciding with frequent mass mortalities, due to factors such as a changing climate and diseases. In this study, macro and micro level marine historical ecology techniques were used to create datasets on topics including: cockle abundance, spawning duration and harvest levels, as well as the ecological factors impacting those cockle populations. These data were correlated with changing climate and the Atlantic Multidecadal Oscillation (AMO) index to assess if they are drivers of cockle abundance and harvesting. The analyses identified the key stakeholder communities involved in cockle research and data acquisition. It highlighted that data collection was sporadic and lacking in cross-national/stakeholder community coordination. A major finding was that local variability in cockle populations is influenced by biotic (parasites) and abiotic (temperature, legislation and harvesting) factors, and at a global scale by climate (AMO Index). This comprehensive study provided an insight into the European cockle fishery but also highlights the need to identify the type of data required, the importance of standardised monitoring, and dissemination efforts, taking into account the knowledge, source, and audience. These factors are key elements that will be highly beneficial not only to the cockle stakeholder communities but to other commercial species.

(PLoS ONE. vol. 15, n° 1932-6203, pp. e0238446, 23/09/2020)

UCC, ULISBOA, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, NERC, GEMEL-Normandie

Direct and indirect facilitation affect community productivity through changes in functional diversity in an alpine system

Xiangtai Wang, Richard Michalet, Lihua Meng, Xianhui Zhou, Shuyan Chen, Guozhen Du, Sa Xiao

Abstract Background and Aims Facilitation is an important ecological process for plant community structure and functional composition. Although direct facilitation has accrued most of the evidence so far, indirect facilitation is ubiquitous in nature and it has an enormous potential to explain community structuring. In this study, we assess the effect of direct and indirect facilitation on community productivity via taxonomic and functional diversity. Methods In an alpine community on the Tibetan Plateau, we manipulated the presence of the shrub Dasiphora fruticosa and graminoids in a fenced meadow and a grazed meadow to quantify the effects of direct and indirect facilitation. We measured four plant traits: height, lateral spread, specific leaf area (SLA) and leaf dry matter content (LDMC) of forbs; calculated two metrics of functional diversity [range of trait and community-weighted mean (CWM) of trait]; and assessed the responses of functional diversity to shrub facilitation. We used structural equation modelling to explore how shrubs directly and indirectly drove community productivity via taxonomic diversity and functional diversity. Key Results We found stronger effects from herbivore-mediated indirect facilitation than direct facilitation on productivity and taxonomic diversity, regardless of the presence of graminoids. For functional diversity, the range and CWM of height and SLA, rather than lateral spread and LDMC, generally increased due to direct and indirect facilitation. Moreover, we found that the range of traits played a primary role over taxonomic diversity and CWM of traits in terms of shrub effects on community productivity. Conclusions Our study reveals that the mechanism of shrub direct and indirect facilitation of community productivity in this alpine community is expanding the realized niche (i.e. expanding range of traits). Our findings indicate that facilitators might increase trait dispersion in the local community, which could alleviate the effect of environmental filters on trait values in harsh environments, thereby contributing to ecosystem functioning.

(Annals of Botany. vol. 127, n° 0305-7364, pp. 241-249, 17/09/2020)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

A new species of Marphysa (Annelida: Eunicida: Eunicidae) from India, with notes on previously described or reported species from the region

Pat Hutchings, Nicolas Lavesque, Lyndsay Priscilla, Margarita G. Kovalenko, E. Malathi, Guillemine Daffe, Kirill A. Kolesnichenko, Christopher J. Glasby, Anna A. Kudryavtseva

A new species of Marphysa is described from India using both morphology and molecular data. The new species, Marphysa madrasi, belonging to the Teretiuscula-group, is characterised by having antennae about 2x longer than the prostomium, maxillae II and IV with a relatively large number of teeth (Mx II with 8+9; Mx IV with 7+11), compound spinigers present on a large range of mid-body chaetigers (at least 83–159), and pectinate chaetae present from the first few anterior chaetigers. We discuss all the species of this genus lacking compound falcigers (i.e., those belonging to the Sanguinea-, Mossambica- and Teretiuscula-groups), which have been reported from India and compare them to our new species. Only two accepted species in these groups can be confirmed as occurring in India, M. madrasi n. sp. and M. gravelyi Southern, 1921. We provide a table that summarises the important characters useful to identify species in this group of Marphysa with compound spinigers.

(Zootaxa, n° 1175-5326, 16/09/2020)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

Reconstruction of the Tiber Deltaic stratigraphic successions near Ostia using the PADM chart and tracking of the bedload-derived facies (Rome, Italy)

Ferréol Salomon, Cécile Vittori, Brice Noirot, Elisa Pleuger, Carlo Rosa, Ilaria Mazzini, Pierre Carbonel, Hatem Djerbi, Piero Bellotti, Jean-Philippe Goiran

Located between the deltaic plain and the subaqueous delta, base level is one of the most important factors that affect depositional elements and the sedimentary architecture of river deltas. In this respect, its changes are essential to reconstruct delta evolution during the Holocene. In this paper, we study three cores drilled in the Tiber delta (Italy). Palaeoenvironmental analyses were performed and included new sedimentological data (laser grain size, loss-on-ignition, magnetic susceptibility), new data from bioindicators (ostracods and macrofauna), and 11 new radiocarbon dates. The three cores were analysed and replaced in a cross section between the Inner and Outer Tiber delta, i.e.,in the palaeolagoon and in the progradational delta plain. First, we have mapped the Holocene transgression and progradation of the Ostia area using palaeoenvironmental age-depth modelling techniques (PADMs). PADM charts help to interpret a stratigraphic succession in a river delta. They contribute to the understanding of the links between depositional environments, sedimentation rate, and sea level rise and to reconstruct coastline trajectories. More precisely, they contribute to the interpretation of the consequences of the sea level jumps dated to the 9000–8000 cal. BP period on coastal environments and help to identify progradational phases (around 4 k, and from 2.8 to 2.6 k cal. BP). Second, we identify indirect (freshwater bioindicators) and direct (bedload-derived facies) evidence of fluvial activity in the studied cross section. The studied deep cores indicate that at least one palaeochannel of the Tiber River was already flowing in the middle/southern part of the delta from 4 k cal. BP. Finally, a first map of the lateral mobility of the palaeochannels of the Tiber River is proposed for the last 6 k cal. BP using the new data and a synthesis of all the data available at the scale of the delta.

(Geomorphology. vol. 365, n° 0169-555X, pp. 107227, 15/09/2020)

LIVE, UNISTRA, CNRS, Archéorient, UL2, CNRS, EVS, ENS de Lyon, Mines Saint-Étienne MSE, IMT, UL2, UJML, INSA Lyon, INSA, UJM, ENTPE, ENSAL, CNRS, ALLHiS, UJM, AGEs, ULiège, Is.I.P.U., CNR, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS, EVEHA, UNIROMA

Dietary bioaccumulation of persistent organic pollutants in the common sole Solea solea in the context of global change. Part 2: Sensitivity of juvenile growth and contamination to toxicokinetic parameters uncertainty and environmental conditions variability in estuaries

Florence Mounier, Véronique Loizeau, Laure Pecquerie, Hilaire Drouineau, Pierre Labadie, Hélène Budzinski, Jérémy Lobry

The amount of potentially toxic chemicals in a fish depends on various environmental factors, such as temperature and feeding ecology, which can be affected by Global Changes (GC). The main objective of the present work was to study the relative influence of temperature, food quality and food availability on the growth and contamination of juveniles of common sole (Solea solea), a marine flatfish species known to be a relevant indicator of the nursery quality. It focuses on two Persistent Organic Pollutants (CB153 and L-PFOS) of legacy and emerging concern, respectively. To achieve this, we used a toxicokinetic (TK) model in which toxicant flows are mechanistically predicted using a bioenergetic model based on the Dynamic Energy Budget (DEB) theory. This modelling framework was applied to juvenile sole from the Gironde estuary (SW France) and allows accounting for the influence of environmental conditions on fish biological processes involved in toxicant fluxes. To compare their respective influence on model predictions of age, length, and contamination at puberty, we included in a global sensitivity analysis: (1) environmental variability gathered from literature for this particular estuary and (2) TK parameters (i.e. assimilation efficiency AE and elimination rate ) variability and uncertainty gathered from literature about each contaminant but for different fish species and experimental conditions. Then, model predictions were confronted to fish contamination measurements from the Gironde Estuary with different combinations of TK parameter values from literature. Results highlighted a key role of diet composition on fish contamination and growth while water temperature only affected growth. It stressed the need to focus on GC impact on benthic communities and their consequences on juvenile fish diet for future work on GC scenarios. Furthermore, for both chemical, the range of variability of TK parameters from experiments led to underestimated fish contaminations. The best model fits were obtained using TK parameter values from model applications: from Mounier et al. (n.d.) for CB153 (Solea solea, experiment, AE=0.8 and =0 d−1) and from de Vos et al. (2008) for PFOS (food chain of the Western Scheldt estuary, The Netherlands, AE=0.8 and =0.8 10−2.d−1).

(Ecological Modelling. vol. 431, n° 0304-3800, pp. 109196, 01/09/2020)

UR EABX, INRAE, BE, IFREMER, IFREMER, LEMAR, IRD, IFREMER, UBO EPE, CNRS, IRD, EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

Exploring Offshore Sediment Evidence of the 1755 CE Tsunami (Faro, Portugal): Implications for the Study of Outer Shelf Tsunami Deposits

Vincent Kümmerer, Teresa Drago, Cristina Veiga-Pires, Pedro Silva, Vitor Magalhães, Anxo Mena, Ana Lopes, Ana Isabel Rodrigues, Sabine Schmidt, Pedro Terrinha, Maria Ana Baptista

Outer shelf sedimentary records are promising for determining the recurrence intervals of tsunamis. However, compared to onshore deposits, offshore deposits are more difficult to access, and so far, studies of outer shelf tsunami deposits are scarce. Here, an example of studying these deposits is presented to infer implications for tsunami-related signatures in similar environments and potentially contribute to pre-historic tsunami event detections. A multidisciplinary approach was performed to detect the sedimentary imprints left by the 1755 CE tsunami in two cores, located in the southern Portuguese continental shelf at water depths of 58 and 91 m. Age models based on 14C and 210Pbxs allowed a probable correspondence with the 1755 CE tsunami event. A multi-proxy approach, including sand composition, grain-size, inorganic geochemistry, magnetic susceptibility, and microtextural features on quartz grain surfaces, yielded evidence for a tsunami depositional signature, although only a subtle terrestrial signal is present. A low contribution of terrestrial material to outer shelf tsunami deposits calls for methodologies that reveal sedimentary structures linked to tsunami event hydrodynamics. Finally, a change in general sedimentation after the tsunami event might have influenced the signature of the 1755 CE tsunami in the outer shelf environment.

(Minerals. vol. 10, n° 2075-163X, pp. 731, 01/09/2020)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS

Antarctic sea-ice and palaeoproductivity variation over the last 156,000 years in the Indian sector of Southern Ocean

Pooja Ghadi, Abhilash Nair, Xavier Crosta, Rahul Mohan, M.C. Manoj, Thamban Meloth

(Marine Micropaleontology. vol. 160, n° 0377-8398, pp. 101894, 01/09/2020)

EPOC, EPHE, PSL, UB, INSU - CNRS, CNRS